Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 0 | 5.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BEHKHNGI_106 | 127434 | 129194 | tet(Q) | ARO:3000191 | tet(Q) | 89.42 | 89.19 | Z21523.1 |
| BEHKHNGI_72 | 48078 | 48968 | CblA-1 | ARO:3002999 | CblA-1 | 100.00 | 100.00 | GQ343019.1 |
| BEHKHNGI_105 | 8233 | 10158 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| BEHKHNGI_16 | 921 | 2087 | tet(X) | ARO:3000205 | tet(X) | 99.74 | 100.00 | M37699.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BEHKHNGI_16 | 56 | 708 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 81.52 | M17808 |
| BEHKHNGI_16 | 921 | 2087 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.91 | 100.00 | M37699 |
| BEHKHNGI_105 | 8233 | 10158 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BEHKHNGI_72 | 48078 | 48965 | cblA | CblA family class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005827792.1 |
| BEHKHNGI_16 | 58 | 705 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | PARTIALX | 100.00 | 81.20 | WP_002682030.1 |
| BEHKHNGI_16 | 924 | 2087 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | BLASTX | 99.74 | 100.00 | WP_008651082.1 |
| BEHKHNGI_105 | 8233 | 10155 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| BEHKHNGI_106 | 127434 | 129215 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | INTERNAL_STOP | 89.23 | 92.67 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| BEHKHNGI_18 | 1740 | 2419 | repUS2 | 682 / 681 | 99.27 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BEHKHNGI_1 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_2 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_3 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_4 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_5 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_6 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_7 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_8 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_9 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_10 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_11 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_12 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_13 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_14 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_15 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_16 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_17 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_18 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_19 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_20 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_21 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_22 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_23 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_24 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_26 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_27 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_28 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_29 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_30 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_31 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_32 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_33 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_34 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_36 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_37 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_38 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_40 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_41 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_42 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_43 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_44 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_45 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_46 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_47 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_48 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_49 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_50 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_51 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_52 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_53 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_54 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_55 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_56 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_57 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_58 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_59 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_60 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_61 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_62 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_63 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_64 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_65 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_66 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_67 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_68 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_69 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_70 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_71 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_72 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_73 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_74 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_75 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_76 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_77 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_78 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_79 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_80 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_81 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_82 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_83 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_84 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_85 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_86 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_87 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_88 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_89 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_90 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_91 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_92 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_93 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_94 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_95 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_96 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_97 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_98 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_99 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_100 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_101 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_102 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_103 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_104 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_105 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_106 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_107 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_108 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_109 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_110 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_111 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_112 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_113 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_114 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_115 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_116 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_117 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_118 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_119 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_120 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_121 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_122 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_123 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_124 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_125 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_126 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_127 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_128 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_129 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_130 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_131 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_132 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_133 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_134 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_135 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_136 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_137 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_138 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_139 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_140 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_141 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_142 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_143 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_144 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_145 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_146 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_147 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_148 | 1.0 | 0.0 | 1.0 |
| BEHKHNGI_149 | 0.0 | 1.0 | 0.0 |
| BEHKHNGI_150 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)