Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 0 | 5.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EIKCEKEN_68 | 57087 | 57977 | CblA-1 | ARO:3002999 | CblA-1 | 100.00 | 100.00 | GQ343019.1 |
| EIKCEKEN_84 | 9199 | 11172 | tet(Q) | ARO:3000191 | tet(Q) | 96.35 | 100.00 | Z21523.1 |
| EIKCEKEN_5 | 943 | 2109 | tet(X) | ARO:3000205 | tet(X) | 99.74 | 100.00 | M37699.1 |
| EIKCEKEN_76 | 73 | 1833 | tet(Q) | ARO:3000191 | tet(Q) | 89.42 | 89.19 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| EIKCEKEN_5 | 78 | 730 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 81.52 | M17808 |
| EIKCEKEN_5 | 943 | 2109 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.91 | 100.00 | M37699 |
| EIKCEKEN_84 | 9199 | 11124 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EIKCEKEN_68 | 57087 | 57974 | cblA | CblA family class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005827792.1 |
| EIKCEKEN_5 | 80 | 727 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | PARTIALX | 100.00 | 81.20 | WP_002682030.1 |
| EIKCEKEN_5 | 946 | 2109 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | BLASTX | 99.74 | 100.00 | WP_008651082.1 |
| EIKCEKEN_84 | 9202 | 11124 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| EIKCEKEN_76 | 52 | 1833 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | INTERNAL_STOP | 89.23 | 92.67 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| EIKCEKEN_8 | 1990 | 2669 | repUS2 | 682 / 681 | 99.27 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EIKCEKEN_1 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_2 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_3 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_4 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_5 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_6 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_7 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_8 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_9 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_10 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_11 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_13 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_14 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_15 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_16 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_17 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_18 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_19 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_20 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_21 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_22 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_23 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_24 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_25 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_26 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_27 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_28 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_29 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_30 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_31 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_32 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_33 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_34 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_35 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_36 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_37 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_38 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_39 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_40 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_41 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_42 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_43 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_44 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_45 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_46 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_47 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_48 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_49 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_50 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_51 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_52 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_53 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_54 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_55 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_56 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_57 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_58 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_59 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_60 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_61 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_62 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_63 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_64 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_65 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_66 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_67 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_68 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_69 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_70 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_71 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_72 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_73 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_74 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_75 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_76 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_77 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_78 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_79 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_80 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_81 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_82 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_83 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_84 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_85 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_86 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_87 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_88 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_89 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_90 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_91 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_92 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_93 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_94 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_95 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_96 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_97 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_98 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_99 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_100 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_101 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_102 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_103 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_104 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_105 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_106 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_107 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_108 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_109 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_110 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_111 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_112 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_113 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_114 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_115 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_116 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_117 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_118 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_119 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_120 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_121 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_122 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_123 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_124 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_125 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_126 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_127 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_128 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_129 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_130 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_131 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_132 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_133 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_134 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_135 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_136 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_137 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_138 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_139 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_140 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_141 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_142 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_143 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_144 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_145 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_146 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_147 | 1.0 | 0.0 | 1.0 |
| EIKCEKEN_148 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_149 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_150 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_151 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_152 | 0.0 | 1.0 | 0.0 |
| EIKCEKEN_153 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EIKCEKEN_84 | 20640 | 31514 | False | Siphoviridae | VOG3992, |
Phigaro v2.4.0 (Database: Jan. 2024 release)