Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 0 | 5.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DIGLJDPO_31 | 24278 | 26203 | tet(Q) | ARO:3000191 | tet(Q) | 89.39 | 97.56 | Z21523.1 |
| DIGLJDPO_31 | 22399 | 23535 | tet(X) | ARO:3000205 | tet(X) | 99.74 | 97.42 | M37699.1 |
| DIGLJDPO_97 | 21858 | 22748 | CblA-1 | ARO:3002999 | CblA-1 | 100.00 | 100.00 | GQ343019.1 |
| DIGLJDPO_31 | 21386 | 22186 | ErmF | ARO:3000498 | ErmF | 99.62 | 100.00 | M17124.1 |
| DIGLJDPO_47 | 9397 | 11370 | tet(Q) | ARO:3000191 | tet(Q) | 96.35 | 100.00 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DIGLJDPO_31 | 21386 | 22186 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 100.00 | M17808 |
| DIGLJDPO_31 | 22399 | 23565 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.91 | 100.00 | M37699 |
| DIGLJDPO_47 | 9397 | 11322 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DIGLJDPO_97 | 21858 | 22745 | cblA | CblA family class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005827792.1 |
| DIGLJDPO_31 | 21386 | 22183 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | EXACTX | 100.00 | 100.00 | WP_002682030.1 |
| DIGLJDPO_31 | 22402 | 23565 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | BLASTX | 99.74 | 100.00 | WP_008651082.1 |
| DIGLJDPO_47 | 9400 | 11322 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| DIGLJDPO_31 | 24281 | 26203 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 89.86 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| DIGLJDPO_2 | 1756 | 2435 | repUS2 | 682 / 681 | 99.27 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DIGLJDPO_1 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_2 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_3 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_4 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_5 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_6 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_7 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_8 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_9 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_10 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_11 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_12 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_13 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_14 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_15 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_16 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_17 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_18 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_19 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_20 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_21 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_22 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_23 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_24 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_25 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_26 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_27 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_28 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_29 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_30 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_31 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_32 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_33 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_34 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_35 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_36 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_37 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_38 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_39 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_40 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_41 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_42 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_43 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_44 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_45 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_46 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_47 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_48 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_49 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_50 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_51 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_52 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_53 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_54 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_55 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_56 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_57 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_58 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_59 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_60 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_61 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_62 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_63 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_64 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_65 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_66 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_67 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_68 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_69 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_70 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_71 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_72 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_73 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_74 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_75 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_76 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_77 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_78 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_79 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_80 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_81 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_82 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_83 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_84 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_85 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_86 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_87 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_88 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_89 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_90 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_91 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_92 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_93 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_94 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_95 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_96 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_97 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_98 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_99 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_100 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_101 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_102 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_103 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_104 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_105 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_106 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_107 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_108 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_109 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_110 | 0.0 | 1.0 | 0.0 |
| DIGLJDPO_111 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_112 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_113 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_114 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_115 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_116 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_117 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_118 | 1.0 | 0.0 | 1.0 |
| DIGLJDPO_119 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| DIGLJDPO_47 | 20838 | 31712 | False | Siphoviridae | VOG3992, |
Phigaro v2.4.0 (Database: Jan. 2024 release)