Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 0 | 3.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IFHDKMPD_237 | 293481 | 295406 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
| IFHDKMPD_204 | 216370 | 217260 | CblA-1 | ARO:3002999 | CblA-1 | 99.66 | 100.00 | GQ343019.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| IFHDKMPD_237 | 293481 | 295406 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IFHDKMPD_111 | 679292 | 680197 | blaMUN-1 | MUN family extended-spectrum class A beta-lactamase MUN-1 | ALLELEX | 100.00 | 100.00 | WP_206340447.1 |
| IFHDKMPD_204 | 216373 | 217260 | cblA | CblA family class A beta-lactamase | BLASTX | 99.66 | 100.00 | WP_005827792.1 |
| IFHDKMPD_237 | 293481 | 295403 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| IFHDKMPD_184 | 72 | 751 | repUS2 | 682 / 681 | 98.83 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IFHDKMPD_1 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_2 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_3 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_4 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_5 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_6 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_7 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_8 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_9 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_10 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_11 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_12 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_13 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_14 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_15 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_16 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_17 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_18 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_19 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_20 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_21 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_22 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_23 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_24 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_25 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_26 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_27 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_28 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_29 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_30 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_31 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_32 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_33 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_34 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_35 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_36 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_37 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_38 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_39 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_40 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_41 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_42 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_43 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_44 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_45 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_46 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_47 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_48 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_49 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_50 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_51 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_52 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_53 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_54 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_55 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_56 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_57 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_58 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_59 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_60 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_61 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_62 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_63 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_64 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_65 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_66 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_67 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_68 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_69 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_70 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_71 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_72 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_73 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_74 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_75 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_76 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_77 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_78 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_79 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_80 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_81 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_82 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_83 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_84 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_85 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_86 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_87 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_88 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_89 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_90 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_91 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_92 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_93 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_94 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_95 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_96 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_97 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_98 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_99 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_100 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_101 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_102 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_103 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_104 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_105 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_106 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_107 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_108 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_109 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_110 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_111 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_112 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_113 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_114 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_115 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_116 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_117 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_118 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_119 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_120 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_121 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_122 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_123 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_124 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_125 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_126 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_127 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_129 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_130 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_131 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_132 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_133 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_134 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_135 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_136 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_137 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_138 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_139 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_140 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_141 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_142 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_143 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_144 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_145 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_146 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_147 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_148 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_149 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_150 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_151 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_152 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_153 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_154 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_155 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_156 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_157 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_158 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_159 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_160 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_161 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_162 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_163 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_164 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_165 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_166 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_167 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_168 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_169 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_171 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_172 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_173 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_174 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_175 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_176 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_177 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_178 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_179 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_180 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_181 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_182 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_183 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_184 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_185 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_186 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_187 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_188 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_189 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_190 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_191 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_192 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_193 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_194 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_195 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_196 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_197 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_198 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_199 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_200 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_201 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_202 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_203 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_204 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_206 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_207 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_208 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_209 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_210 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_211 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_212 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_213 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_214 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_215 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_216 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_217 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_218 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_219 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_220 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_221 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_222 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_224 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_225 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_226 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_227 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_228 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_229 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_230 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_231 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_232 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_233 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_234 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_235 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_236 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_237 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_238 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_239 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_240 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_241 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_242 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_243 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_244 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_245 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_246 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_247 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_248 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_249 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_250 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_251 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_252 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_253 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_254 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_255 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_256 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_257 | 0.0 | 1.0 | 0.0 |
| IFHDKMPD_258 | 1.0 | 0.0 | 1.0 |
| IFHDKMPD_259 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IFHDKMPD_33 | 166925 | 171342 | True | Unknown | VOG0275, |
| IFHDKMPD_204 | 279664 | 282545 | False | Unknown | VOG9702, |
Phigaro v2.4.0 (Database: Jan. 2024 release)