Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EGMPJHDC_44 | 217512 | 218402 | CblA-1 | ARO:3002999 | CblA-1 | 100.00 | 100.00 | GQ343019.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EGMPJHDC_44 | 217515 | 218402 | cblA | CblA family class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005827792.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| EGMPJHDC_54 | 117 | 796 | repUS2 | 682 / 681 | 98.53 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EGMPJHDC_1 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_2 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_3 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_4 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_5 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_6 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_7 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_8 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_9 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_10 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_11 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_12 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_13 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_14 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_15 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_16 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_17 | 1.0 | 0.0 | 1.0 |
| EGMPJHDC_18 | 1.0 | 0.0 | 1.0 |
| EGMPJHDC_19 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_20 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_21 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_22 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_23 | 1.0 | 0.0 | 1.0 |
| EGMPJHDC_24 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_25 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_26 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_27 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_28 | 1.0 | 0.0 | 1.0 |
| EGMPJHDC_29 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_30 | 1.0 | 0.0 | 1.0 |
| EGMPJHDC_31 | 1.0 | 0.0 | 1.0 |
| EGMPJHDC_32 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_33 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_34 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_35 | 1.0 | 0.0 | 1.0 |
| EGMPJHDC_36 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_37 | 1.0 | 0.0 | 1.0 |
| EGMPJHDC_38 | 1.0 | 0.0 | 1.0 |
| EGMPJHDC_39 | 1.0 | 0.0 | 1.0 |
| EGMPJHDC_40 | 1.0 | 0.0 | 1.0 |
| EGMPJHDC_41 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_42 | 1.0 | 0.0 | 1.0 |
| EGMPJHDC_43 | 1.0 | 0.0 | 1.0 |
| EGMPJHDC_44 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_45 | 1.0 | 0.0 | 1.0 |
| EGMPJHDC_46 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_47 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_48 | 1.0 | 0.0 | 1.0 |
| EGMPJHDC_49 | 1.0 | 0.0 | 1.0 |
| EGMPJHDC_50 | 1.0 | 0.0 | 1.0 |
| EGMPJHDC_51 | 1.0 | 0.0 | 1.0 |
| EGMPJHDC_52 | 1.0 | 0.0 | 1.0 |
| EGMPJHDC_53 | 1.0 | 0.0 | 1.0 |
| EGMPJHDC_54 | 1.0 | 0.0 | 1.0 |
| EGMPJHDC_55 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_56 | 1.0 | 0.0 | 1.0 |
| EGMPJHDC_57 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_58 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_59 | 1.0 | 0.0 | 1.0 |
| EGMPJHDC_60 | 1.0 | 0.0 | 1.0 |
| EGMPJHDC_61 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_62 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_63 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_64 | 0.0 | 1.0 | 0.0 |
| EGMPJHDC_65 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EGMPJHDC_4 | 75782 | 87548 | False | Unknown | VOG4690, |
| EGMPJHDC_23 | 20895 | 34018 | False | Unknown | VOG0083, |
Phigaro v2.4.0 (Database: Jan. 2024 release)