Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FFJNMABP_22 | 244987 | 245877 | CblA-1 | ARO:3002999 | CblA-1 | 99.66 | 100.00 | GQ343019.1 |
| FFJNMABP_16 | 17158 | 19083 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| FFJNMABP_16 | 17158 | 19083 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FFJNMABP_22 | 244990 | 245877 | cblA | CblA family class A beta-lactamase | BLASTX | 99.66 | 100.00 | WP_005827792.1 |
| FFJNMABP_16 | 17161 | 19083 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| FFJNMABP_34 | 2096 | 2557 | repUS2 | 463 / 681 | 99.14 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FFJNMABP_1 | 0.0 | 1.0 | 0.0 |
| FFJNMABP_2 | 0.0 | 1.0 | 0.0 |
| FFJNMABP_3 | 0.0 | 1.0 | 0.0 |
| FFJNMABP_4 | 0.0 | 1.0 | 0.0 |
| FFJNMABP_5 | 0.0 | 1.0 | 0.0 |
| FFJNMABP_6 | 0.0 | 1.0 | 0.0 |
| FFJNMABP_7 | 0.0 | 1.0 | 0.0 |
| FFJNMABP_8 | 0.0 | 1.0 | 0.0 |
| FFJNMABP_9 | 0.0 | 1.0 | 0.0 |
| FFJNMABP_10 | 0.0 | 1.0 | 0.0 |
| FFJNMABP_11 | 0.0 | 1.0 | 0.0 |
| FFJNMABP_12 | 0.0 | 1.0 | 0.0 |
| FFJNMABP_13 | 0.0 | 1.0 | 0.0 |
| FFJNMABP_14 | 0.0 | 1.0 | 0.0 |
| FFJNMABP_15 | 0.0 | 1.0 | 0.0 |
| FFJNMABP_16 | 0.0 | 1.0 | 0.0 |
| FFJNMABP_17 | 0.0 | 1.0 | 0.0 |
| FFJNMABP_18 | 0.0 | 1.0 | 0.0 |
| FFJNMABP_19 | 0.0 | 1.0 | 0.0 |
| FFJNMABP_20 | 1.0 | 0.0 | 1.0 |
| FFJNMABP_21 | 0.0 | 1.0 | 0.0 |
| FFJNMABP_22 | 0.0 | 1.0 | 0.0 |
| FFJNMABP_23 | 0.0 | 1.0 | 0.0 |
| FFJNMABP_24 | 0.0 | 1.0 | 0.0 |
| FFJNMABP_25 | 1.0 | 0.0 | 1.0 |
| FFJNMABP_26 | 1.0 | 0.0 | 1.0 |
| FFJNMABP_27 | 1.0 | 0.0 | 1.0 |
| FFJNMABP_28 | 0.0 | 1.0 | 0.0 |
| FFJNMABP_29 | 1.0 | 0.0 | 1.0 |
| FFJNMABP_30 | 1.0 | 0.0 | 1.0 |
| FFJNMABP_32 | 1.0 | 0.0 | 1.0 |
| FFJNMABP_33 | 0.0 | 1.0 | 0.0 |
| FFJNMABP_34 | 1.0 | 0.0 | 1.0 |
| FFJNMABP_35 | 1.0 | 0.0 | 1.0 |
| FFJNMABP_36 | 0.0 | 1.0 | 0.0 |
| FFJNMABP_37 | 0.0 | 1.0 | 0.0 |
| FFJNMABP_38 | 1.0 | 0.0 | 1.0 |
| FFJNMABP_40 | 1.0 | 0.0 | 1.0 |
| FFJNMABP_41 | 1.0 | 0.0 | 1.0 |
| FFJNMABP_42 | 1.0 | 0.0 | 1.0 |
| FFJNMABP_43 | 0.0 | 1.0 | 0.0 |
| FFJNMABP_44 | 0.0 | 1.0 | 0.0 |
| FFJNMABP_45 | 0.0 | 1.0 | 0.0 |
| FFJNMABP_46 | 0.0 | 1.0 | 0.0 |
| FFJNMABP_47 | 0.0 | 1.0 | 0.0 |
| FFJNMABP_48 | 0.0 | 1.0 | 0.0 |
| FFJNMABP_49 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FFJNMABP_45 | 60550 | 77712 | False | Myoviridae | VOG7291, |
Phigaro v2.4.0 (Database: Jan. 2024 release)