Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NFIHKGME_76 | 187 | 1077 | CblA-1 | ARO:3002999 | CblA-1 | 100.00 | 100.00 | GQ343019.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| NFIHKGME_76 | 187 | 1074 | cblA | CblA family class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_005827792.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NFIHKGME_1 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_2 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_3 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_4 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_5 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_6 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_7 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_8 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_9 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_10 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_11 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_12 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_13 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_14 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_15 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_16 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_17 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_18 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_19 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_20 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_21 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_22 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_23 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_24 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_25 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_26 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_27 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_28 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_29 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_30 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_31 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_32 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_33 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_34 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_35 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_36 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_37 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_38 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_39 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_40 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_41 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_42 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_43 | 1.0 | 0.0 | 1.0 |
| NFIHKGME_44 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_45 | 1.0 | 0.0 | 1.0 |
| NFIHKGME_46 | 1.0 | 0.0 | 1.0 |
| NFIHKGME_47 | 1.0 | 0.0 | 1.0 |
| NFIHKGME_48 | 1.0 | 0.0 | 1.0 |
| NFIHKGME_50 | 1.0 | 0.0 | 1.0 |
| NFIHKGME_51 | 1.0 | 0.0 | 1.0 |
| NFIHKGME_52 | 1.0 | 0.0 | 1.0 |
| NFIHKGME_53 | 1.0 | 0.0 | 1.0 |
| NFIHKGME_54 | 1.0 | 0.0 | 1.0 |
| NFIHKGME_55 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_56 | 1.0 | 0.0 | 1.0 |
| NFIHKGME_57 | 1.0 | 0.0 | 1.0 |
| NFIHKGME_58 | 1.0 | 0.0 | 1.0 |
| NFIHKGME_59 | 1.0 | 0.0 | 1.0 |
| NFIHKGME_60 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_61 | 1.0 | 0.0 | 1.0 |
| NFIHKGME_62 | 1.0 | 0.0 | 1.0 |
| NFIHKGME_63 | 1.0 | 0.0 | 1.0 |
| NFIHKGME_64 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_65 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_66 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_67 | 1.0 | 0.0 | 1.0 |
| NFIHKGME_68 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_69 | 1.0 | 0.0 | 1.0 |
| NFIHKGME_70 | 1.0 | 0.0 | 1.0 |
| NFIHKGME_71 | 1.0 | 0.0 | 1.0 |
| NFIHKGME_72 | 1.0 | 0.0 | 1.0 |
| NFIHKGME_73 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_74 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_75 | 1.0 | 0.0 | 1.0 |
| NFIHKGME_76 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_77 | 0.0 | 1.0 | 0.0 |
| NFIHKGME_78 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NFIHKGME_2 | 85093 | 95668 | False | Siphoviridae | VOG0749, |
| NFIHKGME_6 | 21100 | 26106 | False | Siphoviridae | VOG4567, |
| NFIHKGME_11 | 128358 | 140124 | False | Unknown | VOG4690, |
Phigaro v2.4.0 (Database: Jan. 2024 release)