Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KFACAOEJ_40 | 109428 | 111353 | tet(Q) | ARO:3000191 | tet(Q) | 97.50 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| KFACAOEJ_40 | 109428 | 111353 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.17 | 100.00 | L33696 |
| KFACAOEJ_86 | 11288 | 12238 | cfxA3 | Ampicillin | 86.01 | 98.34 | AF472622 |
| KFACAOEJ_86 | 11288 | 12238 | cfxA4 | Unknown Beta-lactam | 86.01 | 98.34 | AY769933 |
| KFACAOEJ_86 | 11288 | 12238 | cfxA5 | Unknown Beta-lactam | 86.01 | 98.34 | AY769934 |
| KFACAOEJ_86 | 11288 | 12238 | cfxA | Cefoxitin, Ampicillin | 86.01 | 98.34 | U38243 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KFACAOEJ_40 | 109431 | 111353 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 98.75 | 100.00 | WP_063856407.1 |
| KFACAOEJ_86 | 11287 | 12240 | cfxA | CfxA family broad-spectrum class A beta-lactamase | BLASTX | 83.65 | 99.07 | WP_004339683.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| KFACAOEJ_101 | 1740 | 2419 | repUS2 | 682 / 681 | 98.53 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KFACAOEJ_10 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_20 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_29 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_36 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_37 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_38 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_39 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_40 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_41 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_42 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_43 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_44 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_45 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_46 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_47 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_48 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_49 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_50 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_51 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_52 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_53 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_54 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_55 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_56 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_57 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_58 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_59 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_60 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_61 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_62 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_63 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_64 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_65 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_66 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_67 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_68 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_69 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_70 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_71 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_72 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_73 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_74 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_75 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_76 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_77 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_78 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_79 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_80 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_81 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_82 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_83 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_84 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_85 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_86 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_87 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_88 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_89 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_90 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_91 | 1.0 | 0.0 | 1.0 |
| KFACAOEJ_92 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_93 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_94 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_95 | 1.0 | 0.0 | 1.0 |
| KFACAOEJ_96 | 1.0 | 0.0 | 1.0 |
| KFACAOEJ_97 | 1.0 | 0.0 | 1.0 |
| KFACAOEJ_98 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_100 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_101 | 1.0 | 0.0 | 1.0 |
| KFACAOEJ_102 | 1.0 | 0.0 | 1.0 |
| KFACAOEJ_103 | 1.0 | 0.0 | 1.0 |
| KFACAOEJ_104 | 1.0 | 0.0 | 1.0 |
| KFACAOEJ_105 | 1.0 | 0.0 | 1.0 |
| KFACAOEJ_106 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_107 | 1.0 | 0.0 | 1.0 |
| KFACAOEJ_108 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_109 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_110 | 1.0 | 0.0 | 1.0 |
| KFACAOEJ_111 | 1.0 | 0.0 | 1.0 |
| KFACAOEJ_112 | 1.0 | 0.0 | 1.0 |
| KFACAOEJ_113 | 1.0 | 0.0 | 1.0 |
| KFACAOEJ_115 | 1.0 | 0.0 | 1.0 |
| KFACAOEJ_116 | 1.0 | 0.0 | 1.0 |
| KFACAOEJ_119 | 0.0 | 1.0 | 0.0 |
| KFACAOEJ_130 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KFACAOEJ_87 | 260884 | 270626 | False | Unknown | VOG0572, |
Phigaro v2.4.0 (Database: Jan. 2024 release)