Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 0 | 0 | 5.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FNAPINNF_32 | 8665 | 9528 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
| FNAPINNF_32 | 7353 | 8489 | tet(X) | ARO:3000205 | tet(X) | 99.47 | 97.42 | M37699.1 |
| FNAPINNF_32 | 6015 | 7154 | tet(X1) | ARO:3005166 | tet(X1) | 99.72 | 105.57 | AJ311171.1 |
| FNAPINNF_32 | 4909 | 5709 | ErmF | ARO:3000498 | ErmF | 97.74 | 100.00 | M17124.1 |
| FNAPINNF_121 | 428 | 2401 | tet(Q) | ARO:3000191 | tet(Q) | 96.04 | 100.00 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| FNAPINNF_32 | 4909 | 5709 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.88 | 100.00 | M62487 |
| FNAPINNF_32 | 7323 | 8489 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.83 | 100.00 | M37699 |
| FNAPINNF_121 | 428 | 2353 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.43 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FNAPINNF_32 | 8665 | 9525 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| FNAPINNF_32 | 7323 | 8486 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | EXACTX | 100.00 | 100.00 | WP_008651082.1 |
| FNAPINNF_32 | 6015 | 7151 | tet(X1) | tetracycline-inactivating monooxygenase Tet(X1) | BLASTX | 99.74 | 100.00 | WP_204376222.1 |
| FNAPINNF_32 | 4912 | 5709 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 99.62 | 100.00 | WP_063844771.1 |
| FNAPINNF_121 | 431 | 2353 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 98.91 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| FNAPINNF_127 | 409 | 1088 | repUS2 | 682 / 681 | 98.53 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FNAPINNF_1 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_2 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_3 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_5 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_6 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_7 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_8 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_9 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_10 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_11 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_12 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_13 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_14 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_15 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_16 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_17 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_18 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_19 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_20 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_21 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_22 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_23 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_24 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_25 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_26 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_27 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_28 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_29 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_30 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_31 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_32 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_33 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_34 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_35 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_36 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_37 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_38 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_39 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_40 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_41 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_42 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_43 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_44 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_45 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_46 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_47 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_48 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_49 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_50 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_51 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_52 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_53 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_54 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_55 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_56 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_57 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_58 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_59 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_60 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_61 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_62 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_63 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_64 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_65 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_66 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_67 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_68 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_69 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_70 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_71 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_72 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_73 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_74 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_75 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_76 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_77 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_78 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_79 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_80 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_81 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_82 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_83 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_84 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_85 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_86 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_87 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_88 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_89 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_90 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_91 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_92 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_93 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_94 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_95 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_96 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_97 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_98 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_99 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_100 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_101 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_102 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_103 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_104 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_105 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_106 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_107 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_108 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_109 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_110 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_111 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_112 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_113 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_114 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_115 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_116 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_117 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_118 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_119 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_120 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_121 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_122 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_123 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_124 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_125 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_126 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_127 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_129 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_130 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_131 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_133 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_134 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_135 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_136 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_137 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_138 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_139 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_140 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_141 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_142 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_143 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_144 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_145 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_146 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_147 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_148 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_149 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_150 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_151 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_152 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_153 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_154 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_155 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_156 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_157 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_158 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_159 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_160 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_161 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_162 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_163 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_164 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_165 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_166 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_167 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_168 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_169 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_170 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_171 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_172 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_173 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_174 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_175 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_176 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_177 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_178 | 0.0 | 1.0 | 0.0 |
| FNAPINNF_179 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_180 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_181 | 1.0 | 0.0 | 1.0 |
| FNAPINNF_182 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FNAPINNF_65 | 59870 | 64645 | False | Siphoviridae | VOG4556, |
| FNAPINNF_87 | 130135 | 140846 | False | Unknown | VOG0083, |
| FNAPINNF_151 | 3824 | 10623 | False | Unknown | VOG6366, |
Phigaro v2.4.0 (Database: Jan. 2024 release)