Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 0 | 0 | 4.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IKOICPBH_137 | 44092 | 44892 | ErmF | ARO:3000498 | ErmF | 97.74 | 100.00 | M17124.1 |
| IKOICPBH_137 | 42647 | 43786 | tet(X1) | ARO:3005166 | tet(X1) | 99.72 | 105.57 | AJ311171.1 |
| IKOICPBH_137 | 41312 | 42448 | tet(X) | ARO:3000205 | tet(X) | 99.47 | 97.42 | M37699.1 |
| IKOICPBH_137 | 40273 | 41136 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| IKOICPBH_137 | 44092 | 44892 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.88 | 100.00 | M62487 |
| IKOICPBH_137 | 41312 | 42478 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.83 | 100.00 | M37699 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IKOICPBH_137 | 40276 | 41136 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| IKOICPBH_137 | 41315 | 42478 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | EXACTX | 100.00 | 100.00 | WP_008651082.1 |
| IKOICPBH_137 | 42650 | 43786 | tet(X1) | tetracycline-inactivating monooxygenase Tet(X1) | BLASTX | 99.74 | 100.00 | WP_204376222.1 |
| IKOICPBH_137 | 44092 | 44889 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 99.62 | 100.00 | WP_063844771.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IKOICPBH_1 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_2 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_3 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_4 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_5 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_6 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_7 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_8 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_9 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_10 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_11 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_12 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_13 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_14 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_15 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_16 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_17 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_18 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_19 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_20 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_21 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_22 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_23 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_24 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_25 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_26 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_27 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_28 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_29 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_30 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_31 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_32 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_33 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_34 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_35 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_36 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_37 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_38 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_39 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_40 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_41 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_42 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_43 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_44 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_45 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_46 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_47 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_48 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_49 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_50 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_51 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_52 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_53 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_54 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_55 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_56 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_57 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_58 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_59 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_60 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_61 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_62 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_63 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_65 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_66 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_67 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_68 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_69 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_70 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_71 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_72 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_73 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_74 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_75 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_76 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_77 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_78 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_79 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_80 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_81 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_83 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_84 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_85 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_86 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_87 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_88 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_89 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_90 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_91 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_92 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_93 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_94 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_95 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_96 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_97 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_98 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_99 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_100 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_102 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_103 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_104 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_106 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_107 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_108 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_109 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_110 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_111 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_112 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_113 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_114 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_115 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_116 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_117 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_118 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_119 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_120 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_121 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_122 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_123 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_124 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_125 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_126 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_127 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_128 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_129 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_130 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_131 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_132 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_133 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_134 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_135 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_136 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_137 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_138 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_139 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_140 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_141 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_142 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_143 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_144 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_145 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_146 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_147 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_148 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_149 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_150 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_151 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_152 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_153 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_154 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_155 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_156 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_157 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_158 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_159 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_160 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_161 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_162 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_163 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_164 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_165 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_166 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_167 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_168 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_169 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_170 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_171 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_172 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_173 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_174 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_175 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_176 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_177 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_178 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_179 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_180 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_181 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_182 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_183 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_184 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_185 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_186 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_187 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_188 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_189 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_190 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_191 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_192 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_193 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_194 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_195 | 1.0 | 0.0 | 1.0 |
| IKOICPBH_196 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_197 | 0.0 | 1.0 | 0.0 |
| IKOICPBH_198 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IKOICPBH_121 | 131904 | 142615 | False | Unknown | VOG0083, |
| IKOICPBH_122 | 11822 | 15774 | False | Unknown | VOG8909, |
| IKOICPBH_140 | 4579 | 12013 | False | Unknown | VOG0572, |
Phigaro v2.4.0 (Database: Jan. 2024 release)