Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 0 | 0 | 4.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HJAHIILD_6 | 13589 | 14389 | ErmF | ARO:3000498 | ErmF | 97.74 | 100.00 | M17124.1 |
| HJAHIILD_6 | 12144 | 13283 | tet(X1) | ARO:3005166 | tet(X1) | 99.72 | 105.57 | AJ311171.1 |
| HJAHIILD_6 | 10809 | 11945 | tet(X) | ARO:3000205 | tet(X) | 99.47 | 97.42 | M37699.1 |
| HJAHIILD_6 | 9770 | 10633 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| HJAHIILD_6 | 13589 | 14389 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.88 | 100.00 | M62487 |
| HJAHIILD_6 | 10809 | 11975 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.83 | 100.00 | M37699 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HJAHIILD_6 | 9773 | 10633 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| HJAHIILD_6 | 10812 | 11975 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | EXACTX | 100.00 | 100.00 | WP_008651082.1 |
| HJAHIILD_6 | 12147 | 13283 | tet(X1) | tetracycline-inactivating monooxygenase Tet(X1) | BLASTX | 99.74 | 100.00 | WP_204376222.1 |
| HJAHIILD_6 | 13589 | 14386 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 99.62 | 100.00 | WP_063844771.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HJAHIILD_1 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_2 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_3 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_4 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_5 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_6 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_7 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_8 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_9 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_10 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_11 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_12 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_13 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_14 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_15 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_16 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_17 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_18 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_19 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_20 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_21 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_22 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_23 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_24 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_25 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_26 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_27 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_28 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_29 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_30 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_31 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_32 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_33 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_34 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_35 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_36 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_37 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_38 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_39 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_40 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_41 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_42 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_43 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_44 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_45 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_46 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_47 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_48 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_49 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_50 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_51 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_52 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_53 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_54 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_55 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_56 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_57 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_58 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_59 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_60 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_61 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_62 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_63 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_64 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_65 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_66 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_67 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_68 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_70 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_71 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_72 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_73 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_74 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_75 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_76 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_77 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_78 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_79 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_80 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_81 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_82 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_83 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_84 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_85 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_86 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_87 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_88 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_89 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_91 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_92 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_93 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_94 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_95 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_96 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_97 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_98 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_99 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_100 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_101 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_102 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_103 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_104 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_105 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_106 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_107 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_108 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_109 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_110 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_111 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_112 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_113 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_114 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_116 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_117 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_118 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_119 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_120 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_121 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_122 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_123 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_124 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_125 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_126 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_127 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_128 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_129 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_130 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_131 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_132 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_133 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_134 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_135 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_136 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_137 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_138 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_139 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_140 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_141 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_142 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_143 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_144 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_145 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_146 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_147 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_148 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_149 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_150 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_151 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_152 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_153 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_154 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_155 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_156 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_157 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_158 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_159 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_160 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_161 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_162 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_163 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_164 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_165 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_166 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_167 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_168 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_169 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_170 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_171 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_172 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_173 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_174 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_175 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_176 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_177 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_178 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_179 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_180 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_181 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_182 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_183 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_184 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_185 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_186 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_187 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_188 | 1.0 | 0.0 | 1.0 |
| HJAHIILD_189 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_190 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_191 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_192 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_193 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_194 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_195 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_196 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_197 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_198 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_199 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_200 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_201 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_202 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_203 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_204 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_205 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_206 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_207 | 0.0 | 1.0 | 0.0 |
| HJAHIILD_208 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HJAHIILD_131 | 131904 | 142615 | False | Unknown | VOG0083, |
| HJAHIILD_134 | 11822 | 15774 | False | Unknown | VOG8909, |
| HJAHIILD_149 | 4579 | 12013 | False | Unknown | VOG0572, |
Phigaro v2.4.0 (Database: Jan. 2024 release)