Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 5 | 2 | 0 | 5.39 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FNHCLJLB_49 | 85595 | 86329 | ErmG | ARO:3000522 | ErmG | 99.18 | 100.00 | L42817.1 |
| FNHCLJLB_94 | 34092 | 36065 | tet(Q) | ARO:3000191 | tet(Q) | 96.35 | 100.00 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| FNHCLJLB_94 | 34092 | 36017 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| FNHCLJLB_49 | 85595 | 86329 | erm(G) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.32 | 100.00 | M15332 |
| FNHCLJLB_49 | 87101 | 88564 | msr(D) | Erythromycin, Azithromycin, Telithromycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 97.54 | 100.00 | AF274302 |
| FNHCLJLB_49 | 88690 | 89904 | mef(A) | Erythromycin, Azithromycin | 94.24 | 99.75 | AF227520 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FNHCLJLB_82 | 81 | 986 | blaMUN-1 | MUN family extended-spectrum class A beta-lactamase MUN-1 | ALLELEX | 100.00 | 100.00 | WP_206340447.1 |
| FNHCLJLB_49 | 85598 | 86329 | erm(G) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G) | BLASTX | 99.59 | 100.00 | WP_063844791.1 |
| FNHCLJLB_94 | 34095 | 36017 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| FNHCLJLB_49 | 87104 | 88564 | msr(D) | ABC-F type ribosomal protection protein Msr(D) | BLASTX | 97.13 | 100.00 | WP_000420313.1 |
| FNHCLJLB_49 | 88681 | 89904 | mef(A) | macrolide efflux MFS transporter Mef(A) | BLASTX | 96.57 | 100.00 | WP_012102963.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| FNHCLJLB_24 | 2780 | 4345 | ECSMS35_RS25765 | 0.0 | Colicin E1 | Exotoxin | 95.21 | 99.94 | WP_000447001 |
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FNHCLJLB_24 | 3143 | 4345 | virulence_ecoli | cea | Colicin E1 | 99.92 | 100.00 | CYCO01000082 |
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| FNHCLJLB_40 | 1 | 509 | repUS2 | 510 / 681 | 99.22 | BFU30316 |
| FNHCLJLB_23 | 2587 | 2740 | Col156 | 154 / 154 | 94.81 | NC009781 |
| FNHCLJLB_24 | 1 | 109 | ColRNAI | 109 / 130 | 92.66 | DQ298019 |
| FNHCLJLB_29 | 3447 | 3648 | Col8282 | 202 / 207 | 89.60 | DQ995352 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FNHCLJLB_1 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_2 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_3 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_4 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_5 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_6 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_7 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_8 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_9 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_10 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_11 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_12 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_13 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_14 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_15 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_16 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_17 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_18 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_19 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_20 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_21 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_22 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_23 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_24 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_25 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_26 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_27 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_28 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_29 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_30 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_31 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_32 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_33 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_35 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_36 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_37 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_38 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_39 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_40 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_41 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_42 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_43 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_44 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_45 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_46 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_47 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_48 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_49 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_50 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_51 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_52 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_53 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_54 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_55 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_56 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_57 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_58 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_59 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_60 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_61 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_62 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_63 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_64 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_65 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_66 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_67 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_68 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_69 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_70 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_71 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_72 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_73 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_74 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_75 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_76 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_77 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_78 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_79 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_80 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_81 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_82 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_83 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_84 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_85 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_86 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_87 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_88 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_89 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_90 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_91 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_92 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_93 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_94 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_95 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_96 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_97 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_98 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_99 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_100 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_101 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_102 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_103 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_104 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_105 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_106 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_107 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_108 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_109 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_110 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_111 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_112 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_113 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_114 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_115 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_116 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_117 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_118 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_119 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_120 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_121 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_122 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_123 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_124 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_125 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_126 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_127 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_128 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_129 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_130 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_131 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_132 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_133 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_134 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_135 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_136 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_137 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_138 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_139 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_140 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_141 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_142 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_143 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_144 | 1.0 | 0.0 | 1.0 |
| FNHCLJLB_145 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_146 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_147 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_148 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_149 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_150 | 0.0 | 1.0 | 0.0 |
| FNHCLJLB_151 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FNHCLJLB_53 | 57253 | 64738 | False | Siphoviridae | VOG0204, |
| FNHCLJLB_79 | 31827 | 42202 | False | Siphoviridae | VOG0749, |
Phigaro v2.4.0 (Database: Jan. 2024 release)