Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KJMHMHAP_67 | 50006 | 51931 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| KJMHMHAP_67 | 50006 | 51931 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KJMHMHAP_67 | 50006 | 51928 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| KJMHMHAP_83 | 1743 | 2323 | repUS2 | 584 / 681 | 80.48 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KJMHMHAP_1 | 1.0 | 0.0 | 1.0 |
| KJMHMHAP_2 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_3 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_4 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_5 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_6 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_7 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_8 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_9 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_10 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_11 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_12 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_13 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_14 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_15 | 1.0 | 0.0 | 1.0 |
| KJMHMHAP_16 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_17 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_18 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_19 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_20 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_21 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_22 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_23 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_24 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_25 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_26 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_27 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_28 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_29 | 1.0 | 0.0 | 1.0 |
| KJMHMHAP_30 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_31 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_32 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_33 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_34 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_35 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_36 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_37 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_38 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_39 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_40 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_41 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_42 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_43 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_44 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_45 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_46 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_47 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_48 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_49 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_50 | 1.0 | 0.0 | 1.0 |
| KJMHMHAP_51 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_52 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_53 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_54 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_55 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_56 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_57 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_58 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_59 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_60 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_61 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_62 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_63 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_64 | 1.0 | 0.0 | 1.0 |
| KJMHMHAP_65 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_66 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_67 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_68 | 1.0 | 0.0 | 1.0 |
| KJMHMHAP_69 | 1.0 | 0.0 | 1.0 |
| KJMHMHAP_70 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_71 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_72 | 1.0 | 0.0 | 1.0 |
| KJMHMHAP_73 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_74 | 1.0 | 0.0 | 1.0 |
| KJMHMHAP_75 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_76 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_77 | 1.0 | 0.0 | 1.0 |
| KJMHMHAP_78 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_80 | 1.0 | 0.0 | 1.0 |
| KJMHMHAP_81 | 1.0 | 0.0 | 1.0 |
| KJMHMHAP_82 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_83 | 1.0 | 0.0 | 1.0 |
| KJMHMHAP_84 | 1.0 | 0.0 | 1.0 |
| KJMHMHAP_85 | 1.0 | 0.0 | 1.0 |
| KJMHMHAP_86 | 1.0 | 0.0 | 1.0 |
| KJMHMHAP_87 | 1.0 | 0.0 | 1.0 |
| KJMHMHAP_88 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_89 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_90 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_91 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_92 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_93 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_94 | 1.0 | 0.0 | 1.0 |
| KJMHMHAP_95 | 1.0 | 0.0 | 1.0 |
| KJMHMHAP_96 | 1.0 | 0.0 | 1.0 |
| KJMHMHAP_97 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_99 | 0.0 | 1.0 | 0.0 |
| KJMHMHAP_100 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KJMHMHAP_34 | 213311 | 221496 | False | Unknown | VOG0572, |
| KJMHMHAP_37 | 25245 | 31348 | False | Myoviridae | VOG2142, |
| KJMHMHAP_37 | 38684 | 47801 | False | Siphoviridae | VOG0572, |
Phigaro v2.4.0 (Database: Jan. 2024 release)