Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 0 | 0 | 4.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MCODBFHG_165 | 44092 | 44892 | ErmF | ARO:3000498 | ErmF | 97.74 | 100.00 | M17124.1 |
| MCODBFHG_165 | 42647 | 43786 | tet(X1) | ARO:3005166 | tet(X1) | 99.72 | 105.57 | AJ311171.1 |
| MCODBFHG_165 | 41312 | 42448 | tet(X) | ARO:3000205 | tet(X) | 99.47 | 97.42 | M37699.1 |
| MCODBFHG_165 | 40273 | 41136 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| MCODBFHG_165 | 44092 | 44892 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.88 | 100.00 | M62487 |
| MCODBFHG_165 | 41312 | 42478 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.83 | 100.00 | M37699 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MCODBFHG_165 | 40276 | 41136 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| MCODBFHG_165 | 41315 | 42478 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | EXACTX | 100.00 | 100.00 | WP_008651082.1 |
| MCODBFHG_165 | 42650 | 43786 | tet(X1) | tetracycline-inactivating monooxygenase Tet(X1) | BLASTX | 99.74 | 100.00 | WP_204376222.1 |
| MCODBFHG_165 | 44092 | 44889 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 99.62 | 100.00 | WP_063844771.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MCODBFHG_1 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_2 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_3 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_4 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_5 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_6 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_7 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_8 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_9 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_10 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_11 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_12 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_13 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_14 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_15 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_16 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_17 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_18 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_19 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_20 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_21 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_22 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_23 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_24 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_25 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_26 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_27 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_28 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_29 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_30 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_31 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_32 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_33 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_34 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_35 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_36 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_37 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_38 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_39 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_40 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_41 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_42 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_43 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_44 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_45 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_46 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_47 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_48 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_49 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_50 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_51 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_52 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_53 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_54 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_55 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_56 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_57 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_58 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_59 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_60 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_61 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_62 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_63 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_64 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_65 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_66 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_67 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_68 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_69 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_70 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_71 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_72 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_73 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_74 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_75 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_76 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_77 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_78 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_79 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_80 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_81 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_82 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_83 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_85 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_86 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_87 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_88 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_89 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_90 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_91 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_92 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_93 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_94 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_95 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_96 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_97 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_98 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_99 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_100 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_101 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_102 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_103 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_105 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_106 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_107 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_108 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_109 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_110 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_111 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_112 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_113 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_114 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_115 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_116 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_117 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_118 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_119 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_120 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_121 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_122 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_123 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_124 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_125 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_126 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_127 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_128 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_130 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_131 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_132 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_133 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_134 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_135 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_136 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_137 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_138 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_139 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_140 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_141 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_142 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_143 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_144 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_145 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_146 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_147 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_148 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_149 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_150 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_151 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_152 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_153 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_154 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_155 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_156 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_157 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_158 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_159 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_160 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_161 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_162 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_163 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_164 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_165 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_166 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_167 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_168 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_169 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_170 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_171 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_172 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_173 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_174 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_175 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_176 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_177 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_178 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_179 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_180 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_181 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_182 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_183 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_184 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_185 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_186 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_187 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_188 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_189 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_190 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_191 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_192 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_193 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_194 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_195 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_196 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_197 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_198 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_199 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_200 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_201 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_202 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_203 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_204 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_205 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_206 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_207 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_208 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_209 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_210 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_211 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_212 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_213 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_214 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_215 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_216 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_217 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_218 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_219 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_220 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_221 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_222 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_223 | 1.0 | 0.0 | 1.0 |
| MCODBFHG_224 | 0.0 | 1.0 | 0.0 |
| MCODBFHG_225 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MCODBFHG_110 | 60182 | 64957 | False | Siphoviridae | VOG4556, |
| MCODBFHG_146 | 11852 | 15804 | False | Unknown | VOG8909, |
| MCODBFHG_166 | 3824 | 10623 | False | Unknown | VOG6366, |
| MCODBFHG_181 | 85999 | 96710 | False | Unknown | VOG0083, |
| MCODBFHG_201 | 15625 | 22394 | False | Unknown | VOG0572, |
Phigaro v2.4.0 (Database: Jan. 2024 release)