Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 0 | 0 | 4.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CBNCELNM_4 | 5667 | 6530 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
| CBNCELNM_4 | 4355 | 5491 | tet(X) | ARO:3000205 | tet(X) | 99.47 | 97.42 | M37699.1 |
| CBNCELNM_4 | 3017 | 4156 | tet(X1) | ARO:3005166 | tet(X1) | 99.72 | 105.57 | AJ311171.1 |
| CBNCELNM_4 | 1911 | 2711 | ErmF | ARO:3000498 | ErmF | 97.74 | 100.00 | M17124.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| CBNCELNM_4 | 1911 | 2711 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.88 | 100.00 | M62487 |
| CBNCELNM_4 | 4325 | 5491 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.83 | 100.00 | M37699 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| CBNCELNM_4 | 5667 | 6527 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| CBNCELNM_4 | 4325 | 5488 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | EXACTX | 100.00 | 100.00 | WP_008651082.1 |
| CBNCELNM_4 | 3017 | 4153 | tet(X1) | tetracycline-inactivating monooxygenase Tet(X1) | BLASTX | 99.74 | 100.00 | WP_204376222.1 |
| CBNCELNM_4 | 1914 | 2711 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 99.62 | 100.00 | WP_063844771.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CBNCELNM_1 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_2 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_3 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_4 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_5 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_6 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_7 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_8 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_9 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_10 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_11 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_12 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_13 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_14 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_15 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_16 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_17 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_18 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_19 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_20 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_21 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_22 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_23 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_24 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_25 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_26 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_27 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_28 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_29 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_30 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_31 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_32 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_33 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_34 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_35 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_36 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_37 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_38 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_39 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_40 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_41 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_42 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_43 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_44 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_45 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_46 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_47 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_48 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_49 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_50 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_51 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_52 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_53 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_54 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_55 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_56 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_57 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_58 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_59 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_60 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_61 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_62 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_63 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_64 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_65 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_66 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_67 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_68 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_69 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_70 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_71 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_72 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_73 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_74 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_75 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_76 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_77 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_78 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_79 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_80 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_81 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_82 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_83 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_84 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_85 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_86 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_88 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_89 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_90 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_91 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_92 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_93 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_94 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_95 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_96 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_97 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_98 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_99 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_100 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_101 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_102 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_103 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_104 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_105 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_107 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_108 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_109 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_110 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_111 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_112 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_113 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_114 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_115 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_116 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_117 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_118 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_119 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_120 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_121 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_122 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_123 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_124 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_125 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_128 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_129 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_130 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_131 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_132 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_133 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_134 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_135 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_136 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_137 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_138 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_139 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_140 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_141 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_142 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_143 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_144 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_145 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_146 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_147 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_148 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_149 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_150 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_151 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_152 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_153 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_154 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_155 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_156 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_157 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_158 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_159 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_160 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_161 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_162 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_163 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_164 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_165 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_166 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_167 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_168 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_169 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_170 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_171 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_172 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_173 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_174 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_175 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_176 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_177 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_178 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_179 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_180 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_181 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_182 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_183 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_184 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_185 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_186 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_187 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_188 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_189 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_190 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_191 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_192 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_193 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_194 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_195 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_196 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_197 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_198 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_199 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_200 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_201 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_202 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_203 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_204 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_205 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_206 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_207 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_208 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_209 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_210 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_211 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_212 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_213 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_214 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_215 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_216 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_217 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_218 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_219 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_220 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_221 | 1.0 | 0.0 | 1.0 |
| CBNCELNM_222 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_223 | 0.0 | 1.0 | 0.0 |
| CBNCELNM_224 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CBNCELNM_145 | 11838 | 15790 | False | Unknown | VOG8909, |
| CBNCELNM_147 | 130397 | 141108 | False | Unknown | VOG0083, |
| CBNCELNM_150 | 43268 | 48043 | False | Siphoviridae | VOG4556, |
| CBNCELNM_181 | 3824 | 10623 | False | Unknown | VOG6366, |
Phigaro v2.4.0 (Database: Jan. 2024 release)