Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 0 | 0 | 4.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HLNBPCGI_15 | 5667 | 6530 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
| HLNBPCGI_15 | 4355 | 5491 | tet(X) | ARO:3000205 | tet(X) | 99.47 | 97.42 | M37699.1 |
| HLNBPCGI_15 | 3017 | 4156 | tet(X1) | ARO:3005166 | tet(X1) | 99.72 | 105.57 | AJ311171.1 |
| HLNBPCGI_15 | 1911 | 2711 | ErmF | ARO:3000498 | ErmF | 97.74 | 100.00 | M17124.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| HLNBPCGI_15 | 1911 | 2711 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.88 | 100.00 | M62487 |
| HLNBPCGI_15 | 4325 | 5491 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.83 | 100.00 | M37699 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HLNBPCGI_15 | 5667 | 6527 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| HLNBPCGI_15 | 4325 | 5488 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | EXACTX | 100.00 | 100.00 | WP_008651082.1 |
| HLNBPCGI_15 | 3017 | 4153 | tet(X1) | tetracycline-inactivating monooxygenase Tet(X1) | BLASTX | 99.74 | 100.00 | WP_204376222.1 |
| HLNBPCGI_15 | 1914 | 2711 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 99.62 | 100.00 | WP_063844771.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HLNBPCGI_1 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_2 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_3 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_4 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_5 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_6 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_7 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_8 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_9 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_10 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_11 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_12 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_13 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_14 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_15 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_16 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_17 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_18 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_19 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_20 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_21 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_22 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_23 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_24 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_25 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_26 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_27 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_28 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_29 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_30 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_31 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_32 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_33 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_34 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_35 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_36 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_37 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_38 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_39 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_40 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_41 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_42 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_43 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_44 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_45 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_46 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_47 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_48 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_49 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_50 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_51 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_52 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_53 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_54 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_55 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_56 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_57 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_58 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_59 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_60 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_61 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_62 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_63 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_64 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_65 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_66 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_67 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_68 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_69 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_70 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_71 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_72 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_73 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_74 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_75 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_76 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_77 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_78 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_79 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_80 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_81 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_82 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_83 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_84 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_85 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_86 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_87 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_88 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_89 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_90 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_91 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_92 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_93 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_94 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_95 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_96 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_97 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_98 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_99 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_100 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_101 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_102 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_103 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_104 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_106 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_107 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_108 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_109 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_110 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_111 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_112 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_113 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_114 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_115 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_116 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_117 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_118 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_119 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_120 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_121 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_122 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_124 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_125 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_126 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_127 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_128 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_129 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_130 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_131 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_132 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_133 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_134 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_135 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_136 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_137 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_139 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_140 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_141 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_142 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_143 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_144 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_145 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_146 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_147 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_148 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_149 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_150 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_151 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_152 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_154 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_155 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_156 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_157 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_158 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_159 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_160 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_161 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_162 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_163 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_164 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_165 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_166 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_167 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_168 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_169 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_170 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_171 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_172 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_173 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_174 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_175 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_176 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_177 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_179 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_180 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_181 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_182 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_183 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_184 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_185 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_186 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_187 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_188 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_189 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_190 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_191 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_192 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_193 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_194 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_195 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_196 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_197 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_198 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_199 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_200 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_201 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_202 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_203 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_204 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_205 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_206 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_207 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_208 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_209 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_210 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_211 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_212 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_213 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_214 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_215 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_216 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_217 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_218 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_219 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_220 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_221 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_222 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_223 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_224 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_225 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_226 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_227 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_228 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_229 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_230 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_231 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_232 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_233 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_234 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_235 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_236 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_237 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_238 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_239 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_240 | 1.0 | 0.0 | 1.0 |
| HLNBPCGI_241 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_242 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_243 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_244 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_245 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_246 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_247 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_248 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_249 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_250 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_251 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_252 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_253 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_254 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_255 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_256 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_257 | 0.0 | 1.0 | 0.0 |
| HLNBPCGI_258 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HLNBPCGI_77 | 58172 | 65541 | False | Siphoviridae | VOG4581, |
| HLNBPCGI_111 | 127952 | 138663 | False | Unknown | VOG0083, |
| HLNBPCGI_233 | 11841 | 15793 | False | Unknown | VOG8909, |
| HLNBPCGI_237 | 22846 | 30731 | False | Unknown | VOG4573, |
Phigaro v2.4.0 (Database: Jan. 2024 release)