Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 4 | 0 | 0 | 4.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BFKNIEGI_166 | 43824 | 44624 | ErmF | ARO:3000498 | ErmF | 97.74 | 100.00 | M17124.1 |
| BFKNIEGI_166 | 42379 | 43518 | tet(X1) | ARO:3005166 | tet(X1) | 99.72 | 105.57 | AJ311171.1 |
| BFKNIEGI_166 | 41044 | 42180 | tet(X) | ARO:3000205 | tet(X) | 99.47 | 97.42 | M37699.1 |
| BFKNIEGI_166 | 40005 | 40868 | aadS | ARO:3004683 | aadS | 100.00 | 100.00 | M72415.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BFKNIEGI_166 | 43824 | 44624 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 99.88 | 100.00 | M62487 |
| BFKNIEGI_166 | 41044 | 42210 | tet(X) | Doxycycline, Tetracycline, Minocycline, Tigecycline | 99.83 | 100.00 | M37699 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BFKNIEGI_166 | 40008 | 40868 | aadS | aminoglycoside 6-adenylyltransferase AadS | EXACTX | 100.00 | 100.00 | WP_003013318.1 |
| BFKNIEGI_166 | 41047 | 42210 | tet(X2) | tetracycline-inactivating monooxygenase Tet(X2) | EXACTX | 100.00 | 100.00 | WP_008651082.1 |
| BFKNIEGI_166 | 42382 | 43518 | tet(X1) | tetracycline-inactivating monooxygenase Tet(X1) | BLASTX | 99.74 | 100.00 | WP_204376222.1 |
| BFKNIEGI_166 | 43824 | 44621 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | BLASTX | 99.62 | 100.00 | WP_063844771.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BFKNIEGI_1 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_2 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_3 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_4 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_5 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_6 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_7 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_8 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_9 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_10 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_11 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_12 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_13 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_14 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_15 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_16 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_17 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_18 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_19 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_20 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_21 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_22 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_23 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_24 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_25 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_26 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_27 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_28 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_29 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_30 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_31 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_32 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_33 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_34 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_35 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_36 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_37 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_38 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_39 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_40 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_41 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_42 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_43 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_44 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_45 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_46 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_47 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_48 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_49 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_50 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_51 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_52 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_53 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_54 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_55 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_56 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_57 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_58 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_59 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_60 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_61 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_62 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_63 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_64 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_65 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_66 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_67 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_68 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_69 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_70 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_71 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_72 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_73 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_74 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_75 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_76 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_77 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_78 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_80 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_81 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_82 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_83 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_84 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_85 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_86 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_87 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_88 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_89 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_90 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_91 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_92 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_93 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_94 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_95 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_96 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_97 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_98 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_99 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_100 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_102 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_106 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_107 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_108 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_109 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_110 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_111 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_112 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_113 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_114 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_115 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_116 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_117 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_118 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_119 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_120 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_121 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_122 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_123 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_124 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_125 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_126 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_127 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_130 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_131 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_132 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_133 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_134 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_135 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_136 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_137 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_138 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_139 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_140 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_141 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_142 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_143 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_144 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_145 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_146 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_147 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_148 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_149 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_150 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_151 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_152 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_153 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_154 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_155 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_156 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_157 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_158 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_159 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_160 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_161 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_162 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_163 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_164 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_165 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_166 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_167 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_168 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_169 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_170 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_171 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_172 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_173 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_174 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_175 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_176 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_177 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_178 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_179 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_180 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_181 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_182 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_183 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_184 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_185 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_186 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_187 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_188 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_189 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_190 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_191 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_192 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_193 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_194 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_195 | 1.0 | 0.0 | 1.0 |
| BFKNIEGI_196 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_197 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_198 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_199 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_200 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_201 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_202 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_203 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_204 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_205 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_206 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_207 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_208 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_209 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_210 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_211 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_212 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_213 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_214 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_215 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_216 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_217 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_218 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_219 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_220 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_221 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_222 | 0.0 | 1.0 | 0.0 |
| BFKNIEGI_223 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BFKNIEGI_143 | 11869 | 15821 | False | Unknown | VOG8909, |
| BFKNIEGI_145 | 57604 | 68315 | False | Unknown | VOG5821, |
| BFKNIEGI_151 | 43268 | 48043 | False | Siphoviridae | VOG4556, |
| BFKNIEGI_165 | 3824 | 10623 | False | Unknown | VOG6366, |
Phigaro v2.4.0 (Database: Jan. 2024 release)