Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JEOKJBPC_109 | 52270 | 54195 | tet(Q) | ARO:3000191 | tet(Q) | 97.50 | 97.56 | Z21523.1 |
| JEOKJBPC_109 | 42173 | 42907 | ErmG | ARO:3000522 | ErmG | 100.00 | 100.00 | L42817.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| JEOKJBPC_109 | 42173 | 42907 | erm(G) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 100.00 | L42817 |
| JEOKJBPC_109 | 52270 | 54195 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 97.82 | 100.00 | Z21523 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JEOKJBPC_109 | 42173 | 42904 | erm(G) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(G) | EXACTX | 100.00 | 100.00 | WP_063844787.1 |
| JEOKJBPC_109 | 52270 | 54192 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 97.50 | 100.00 | WP_002560998.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JEOKJBPC_1 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_2 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_3 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_4 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_5 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_6 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_7 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_8 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_9 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_10 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_11 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_12 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_13 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_14 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_15 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_16 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_17 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_18 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_19 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_20 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_21 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_22 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_23 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_24 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_25 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_26 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_27 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_28 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_29 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_30 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_31 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_33 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_34 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_35 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_36 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_37 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_38 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_39 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_40 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_41 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_42 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_43 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_45 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_46 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_47 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_48 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_49 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_50 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_51 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_52 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_53 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_54 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_55 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_56 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_57 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_58 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_59 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_60 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_61 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_62 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_63 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_64 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_65 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_66 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_67 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_68 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_69 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_70 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_71 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_72 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_73 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_74 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_75 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_76 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_77 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_78 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_79 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_80 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_81 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_82 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_83 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_84 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_85 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_86 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_87 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_88 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_89 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_90 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_91 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_92 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_93 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_94 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_95 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_96 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_97 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_98 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_99 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_100 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_101 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_102 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_103 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_104 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_105 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_106 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_107 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_108 | 1.0 | 0.0 | 1.0 |
| JEOKJBPC_109 | 0.0 | 1.0 | 0.0 |
| JEOKJBPC_110 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JEOKJBPC_13 | 65607 | 75617 | False | Unknown | VOG3992, |
| JEOKJBPC_47 | 26311 | 37186 | False | Siphoviridae | VOG0749, |
| JEOKJBPC_65 | 5004 | 13012 | True | Siphoviridae | VOG6282, |
Phigaro v2.4.0 (Database: Jan. 2024 release)