Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FMJJFIOC_68 | 158846 | 160771 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| FMJJFIOC_68 | 158846 | 160771 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| FMJJFIOC_68 | 158846 | 160768 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| FMJJFIOC_80 | 626 | 1206 | repUS2 | 584 / 681 | 80.48 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FMJJFIOC_2 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_3 | 1.0 | 0.0 | 1.0 |
| FMJJFIOC_4 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_5 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_6 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_7 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_8 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_9 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_10 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_11 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_12 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_13 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_14 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_15 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_16 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_17 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_18 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_19 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_20 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_21 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_22 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_23 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_24 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_25 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_26 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_27 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_28 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_29 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_30 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_31 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_32 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_33 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_34 | 1.0 | 0.0 | 1.0 |
| FMJJFIOC_35 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_36 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_37 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_38 | 1.0 | 0.0 | 1.0 |
| FMJJFIOC_39 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_40 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_41 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_42 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_43 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_44 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_45 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_46 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_47 | 1.0 | 0.0 | 1.0 |
| FMJJFIOC_48 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_49 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_50 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_51 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_52 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_53 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_54 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_55 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_56 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_57 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_58 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_59 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_60 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_61 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_62 | 1.0 | 0.0 | 1.0 |
| FMJJFIOC_63 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_64 | 1.0 | 0.0 | 1.0 |
| FMJJFIOC_65 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_66 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_67 | 1.0 | 0.0 | 1.0 |
| FMJJFIOC_68 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_69 | 1.0 | 0.0 | 1.0 |
| FMJJFIOC_70 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_71 | 1.0 | 0.0 | 1.0 |
| FMJJFIOC_73 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_74 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_75 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_76 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_78 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_79 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_80 | 1.0 | 0.0 | 1.0 |
| FMJJFIOC_81 | 1.0 | 0.0 | 1.0 |
| FMJJFIOC_82 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_83 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_84 | 1.0 | 0.0 | 1.0 |
| FMJJFIOC_85 | 1.0 | 0.0 | 1.0 |
| FMJJFIOC_86 | 1.0 | 0.0 | 1.0 |
| FMJJFIOC_87 | 1.0 | 0.0 | 1.0 |
| FMJJFIOC_88 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_89 | 1.0 | 0.0 | 1.0 |
| FMJJFIOC_90 | 0.0 | 1.0 | 0.0 |
| FMJJFIOC_92 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FMJJFIOC_2 | 9132 | 16617 | False | Siphoviridae | VOG0204, |
| FMJJFIOC_14 | 5242 | 15817 | False | Siphoviridae | VOG0749, |
| FMJJFIOC_25 | 34830 | 44250 | False | Siphoviridae | VOG0749, |
Phigaro v2.4.0 (Database: Jan. 2024 release)