Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PELGECBO_30 | 89772 | 91697 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| PELGECBO_30 | 89772 | 91697 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| PELGECBO_30 | 89772 | 91694 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| PELGECBO_121 | 38 | 717 | repUS2 | 682 / 681 | 98.53 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PELGECBO_1 | 0.0 | 1.0 | 0.0 |
| PELGECBO_2 | 1.0 | 0.0 | 1.0 |
| PELGECBO_4 | 0.0 | 1.0 | 0.0 |
| PELGECBO_5 | 0.0 | 1.0 | 0.0 |
| PELGECBO_6 | 1.0 | 0.0 | 1.0 |
| PELGECBO_7 | 1.0 | 0.0 | 1.0 |
| PELGECBO_9 | 1.0 | 0.0 | 1.0 |
| PELGECBO_11 | 0.0 | 1.0 | 0.0 |
| PELGECBO_12 | 0.0 | 1.0 | 0.0 |
| PELGECBO_13 | 1.0 | 0.0 | 1.0 |
| PELGECBO_14 | 0.0 | 1.0 | 0.0 |
| PELGECBO_16 | 1.0 | 0.0 | 1.0 |
| PELGECBO_18 | 1.0 | 0.0 | 1.0 |
| PELGECBO_19 | 0.0 | 1.0 | 0.0 |
| PELGECBO_20 | 0.0 | 1.0 | 0.0 |
| PELGECBO_21 | 1.0 | 0.0 | 1.0 |
| PELGECBO_22 | 0.0 | 1.0 | 0.0 |
| PELGECBO_24 | 0.0 | 1.0 | 0.0 |
| PELGECBO_25 | 0.0 | 1.0 | 0.0 |
| PELGECBO_26 | 0.0 | 1.0 | 0.0 |
| PELGECBO_27 | 1.0 | 0.0 | 1.0 |
| PELGECBO_28 | 0.0 | 1.0 | 0.0 |
| PELGECBO_29 | 0.0 | 1.0 | 0.0 |
| PELGECBO_30 | 0.0 | 1.0 | 0.0 |
| PELGECBO_31 | 0.0 | 1.0 | 0.0 |
| PELGECBO_32 | 0.0 | 1.0 | 0.0 |
| PELGECBO_33 | 0.0 | 1.0 | 0.0 |
| PELGECBO_34 | 0.0 | 1.0 | 0.0 |
| PELGECBO_35 | 0.0 | 1.0 | 0.0 |
| PELGECBO_36 | 0.0 | 1.0 | 0.0 |
| PELGECBO_37 | 0.0 | 1.0 | 0.0 |
| PELGECBO_38 | 0.0 | 1.0 | 0.0 |
| PELGECBO_39 | 0.0 | 1.0 | 0.0 |
| PELGECBO_40 | 0.0 | 1.0 | 0.0 |
| PELGECBO_41 | 0.0 | 1.0 | 0.0 |
| PELGECBO_42 | 0.0 | 1.0 | 0.0 |
| PELGECBO_43 | 0.0 | 1.0 | 0.0 |
| PELGECBO_44 | 0.0 | 1.0 | 0.0 |
| PELGECBO_45 | 0.0 | 1.0 | 0.0 |
| PELGECBO_46 | 0.0 | 1.0 | 0.0 |
| PELGECBO_47 | 0.0 | 1.0 | 0.0 |
| PELGECBO_48 | 0.0 | 1.0 | 0.0 |
| PELGECBO_49 | 0.0 | 1.0 | 0.0 |
| PELGECBO_50 | 0.0 | 1.0 | 0.0 |
| PELGECBO_51 | 0.0 | 1.0 | 0.0 |
| PELGECBO_52 | 0.0 | 1.0 | 0.0 |
| PELGECBO_53 | 0.0 | 1.0 | 0.0 |
| PELGECBO_54 | 0.0 | 1.0 | 0.0 |
| PELGECBO_55 | 0.0 | 1.0 | 0.0 |
| PELGECBO_56 | 0.0 | 1.0 | 0.0 |
| PELGECBO_57 | 0.0 | 1.0 | 0.0 |
| PELGECBO_58 | 0.0 | 1.0 | 0.0 |
| PELGECBO_59 | 0.0 | 1.0 | 0.0 |
| PELGECBO_60 | 0.0 | 1.0 | 0.0 |
| PELGECBO_61 | 0.0 | 1.0 | 0.0 |
| PELGECBO_62 | 0.0 | 1.0 | 0.0 |
| PELGECBO_63 | 0.0 | 1.0 | 0.0 |
| PELGECBO_64 | 1.0 | 0.0 | 1.0 |
| PELGECBO_65 | 0.0 | 1.0 | 0.0 |
| PELGECBO_66 | 0.0 | 1.0 | 0.0 |
| PELGECBO_67 | 0.0 | 1.0 | 0.0 |
| PELGECBO_68 | 0.0 | 1.0 | 0.0 |
| PELGECBO_69 | 0.0 | 1.0 | 0.0 |
| PELGECBO_70 | 0.0 | 1.0 | 0.0 |
| PELGECBO_71 | 1.0 | 0.0 | 1.0 |
| PELGECBO_72 | 0.0 | 1.0 | 0.0 |
| PELGECBO_73 | 0.0 | 1.0 | 0.0 |
| PELGECBO_74 | 0.0 | 1.0 | 0.0 |
| PELGECBO_75 | 0.0 | 1.0 | 0.0 |
| PELGECBO_76 | 0.0 | 1.0 | 0.0 |
| PELGECBO_77 | 1.0 | 0.0 | 1.0 |
| PELGECBO_78 | 0.0 | 1.0 | 0.0 |
| PELGECBO_79 | 0.0 | 1.0 | 0.0 |
| PELGECBO_80 | 0.0 | 1.0 | 0.0 |
| PELGECBO_81 | 1.0 | 0.0 | 1.0 |
| PELGECBO_82 | 0.0 | 1.0 | 0.0 |
| PELGECBO_83 | 0.0 | 1.0 | 0.0 |
| PELGECBO_84 | 0.0 | 1.0 | 0.0 |
| PELGECBO_85 | 0.0 | 1.0 | 0.0 |
| PELGECBO_86 | 0.0 | 1.0 | 0.0 |
| PELGECBO_87 | 0.0 | 1.0 | 0.0 |
| PELGECBO_88 | 0.0 | 1.0 | 0.0 |
| PELGECBO_89 | 0.0 | 1.0 | 0.0 |
| PELGECBO_90 | 0.0 | 1.0 | 0.0 |
| PELGECBO_91 | 0.0 | 1.0 | 0.0 |
| PELGECBO_92 | 0.0 | 1.0 | 0.0 |
| PELGECBO_93 | 1.0 | 0.0 | 1.0 |
| PELGECBO_94 | 0.0 | 1.0 | 0.0 |
| PELGECBO_95 | 0.0 | 1.0 | 0.0 |
| PELGECBO_96 | 1.0 | 0.0 | 1.0 |
| PELGECBO_97 | 1.0 | 0.0 | 1.0 |
| PELGECBO_98 | 0.0 | 1.0 | 0.0 |
| PELGECBO_99 | 0.0 | 1.0 | 0.0 |
| PELGECBO_100 | 0.0 | 1.0 | 0.0 |
| PELGECBO_101 | 0.0 | 1.0 | 0.0 |
| PELGECBO_102 | 1.0 | 0.0 | 1.0 |
| PELGECBO_103 | 0.0 | 1.0 | 0.0 |
| PELGECBO_104 | 0.0 | 1.0 | 0.0 |
| PELGECBO_105 | 0.0 | 1.0 | 0.0 |
| PELGECBO_106 | 0.0 | 1.0 | 0.0 |
| PELGECBO_107 | 1.0 | 0.0 | 1.0 |
| PELGECBO_108 | 0.0 | 1.0 | 0.0 |
| PELGECBO_109 | 0.0 | 1.0 | 0.0 |
| PELGECBO_110 | 0.0 | 1.0 | 0.0 |
| PELGECBO_111 | 0.0 | 1.0 | 0.0 |
| PELGECBO_112 | 1.0 | 0.0 | 1.0 |
| PELGECBO_113 | 1.0 | 0.0 | 1.0 |
| PELGECBO_114 | 1.0 | 0.0 | 1.0 |
| PELGECBO_115 | 1.0 | 0.0 | 1.0 |
| PELGECBO_116 | 0.0 | 1.0 | 0.0 |
| PELGECBO_117 | 0.0 | 1.0 | 0.0 |
| PELGECBO_118 | 0.0 | 1.0 | 0.0 |
| PELGECBO_119 | 1.0 | 0.0 | 1.0 |
| PELGECBO_120 | 1.0 | 0.0 | 1.0 |
| PELGECBO_121 | 1.0 | 0.0 | 1.0 |
| PELGECBO_122 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| PELGECBO_52 | 34922 | 44573 | False | Siphoviridae | VOG0749, |
| PELGECBO_111 | 4611 | 12096 | False | Siphoviridae | VOG0204, |
Phigaro v2.4.0 (Database: Jan. 2024 release)