Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 0 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JEMFIHEI_43 | 460684 | 464367 | Bifidobacterium adolescentis rpoB mutants conferring resistance to rifampicin | ARO:3004480 | Bado_rpoB_RIF | 91.30 | 103.46 | NC_008618.1 |
| JEMFIHEI_32 | 395674 | 399000 | Bifidobacterium bifidum ileS conferring resistance to mupirocin | ARO:3003730 | Bbif_ileS_MUP | 99.46 | 100.09 | CP001840.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JEMFIHEI_1 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_2 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_3 | 1.0 | 0.0 | 1.0 |
| JEMFIHEI_4 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_5 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_6 | 1.0 | 0.0 | 1.0 |
| JEMFIHEI_7 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_8 | 1.0 | 0.0 | 1.0 |
| JEMFIHEI_9 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_10 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_11 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_12 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_13 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_14 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_15 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_16 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_17 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_18 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_19 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_20 | 1.0 | 0.0 | 1.0 |
| JEMFIHEI_21 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_22 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_23 | 1.0 | 0.0 | 1.0 |
| JEMFIHEI_24 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_25 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_26 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_27 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_28 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_29 | 1.0 | 0.0 | 1.0 |
| JEMFIHEI_30 | 1.0 | 0.0 | 1.0 |
| JEMFIHEI_31 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_32 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_33 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_34 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_35 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_36 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_37 | 1.0 | 0.0 | 1.0 |
| JEMFIHEI_38 | 1.0 | 0.0 | 1.0 |
| JEMFIHEI_39 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_40 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_41 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_42 | 1.0 | 0.0 | 1.0 |
| JEMFIHEI_43 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_44 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_45 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_46 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_47 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_48 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_49 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_50 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_51 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_52 | 1.0 | 0.0 | 1.0 |
| JEMFIHEI_53 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_54 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_55 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_56 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_57 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_58 | 1.0 | 0.0 | 1.0 |
| JEMFIHEI_59 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_60 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_61 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_62 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_63 | 1.0 | 0.0 | 1.0 |
| JEMFIHEI_64 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_65 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_66 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_67 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_68 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_69 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_70 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_71 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_72 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_73 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_74 | 1.0 | 0.0 | 1.0 |
| JEMFIHEI_76 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_77 | 1.0 | 0.0 | 1.0 |
| JEMFIHEI_78 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_79 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_80 | 1.0 | 0.0 | 1.0 |
| JEMFIHEI_81 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_83 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_84 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_85 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_86 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_87 | 1.0 | 0.0 | 1.0 |
| JEMFIHEI_88 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_89 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_90 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_91 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_92 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_93 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_94 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_95 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_96 | 1.0 | 0.0 | 1.0 |
| JEMFIHEI_97 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_98 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_99 | 1.0 | 0.0 | 1.0 |
| JEMFIHEI_100 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_101 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_102 | 0.0 | 1.0 | 0.0 |
| JEMFIHEI_103 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JEMFIHEI_95 | 15371 | 26539 | False | Myoviridae / Podoviridae | VOG5689, VOG0382, VOG0052, VOG8190 |
Phigaro v2.4.0 (Database: Jan. 2024 release)