Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FLHMNOBM_35 | 37936 | 38133 | CspA | 2.05e-28 | cold shock protein | 80.30 | 100.00 | CAA62903 |
| FLHMNOBM_35 | 37936 | 38130 | CspR | 8.92e-28 | cold shock protein | 81.54 | 98.48 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FLHMNOBM_1 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_2 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_3 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_4 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_5 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_6 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_7 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_8 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_9 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_10 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_11 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_12 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_13 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_14 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_15 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_16 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_17 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_19 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_20 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_21 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_22 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_23 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_24 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_25 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_26 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_27 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_28 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_29 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_30 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_31 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_32 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_33 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_34 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_35 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_36 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_37 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_38 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_39 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_40 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_41 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_42 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_43 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_44 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_45 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_46 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_47 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_48 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_49 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_50 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_51 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_52 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_53 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_54 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_55 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_56 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_57 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_58 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_59 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_60 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_61 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_62 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_63 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_64 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_65 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_66 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_67 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_68 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_69 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_70 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_71 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_72 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_73 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_74 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_75 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_76 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_77 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_78 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_79 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_80 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_82 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_83 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_84 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_85 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_86 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_87 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_88 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_89 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_90 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_91 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_93 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_94 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_95 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_96 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_97 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_98 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_99 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_100 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_101 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_102 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_103 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_104 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_105 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_106 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_107 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_108 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_109 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_110 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_111 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_112 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_113 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_114 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_115 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_116 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_117 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_118 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_119 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_120 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_121 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_122 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_123 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_124 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_125 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_126 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_127 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_128 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_129 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_130 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_131 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_132 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_133 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_134 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_135 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_136 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_137 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_138 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_139 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_140 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_141 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_142 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_143 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_144 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_145 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_146 | 1.0 | 0.0 | 1.0 |
| FLHMNOBM_147 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_148 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_149 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_150 | 0.0 | 1.0 | 0.0 |
| FLHMNOBM_151 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FLHMNOBM_64 | 74345 | 90986 | False | Siphoviridae | VOG5088, VOG10914, VOG1319, VOG4713, VOG0723, VOG5660, VOG0724, VOG0799, VOG0725, VOG4545, VOG0727, VOG4599, VOG0648, VOG0641 |
| FLHMNOBM_64 | 108881 | 113465 | False | Unknown | VOG1309, VOG0186, VOG0226, VOG4566 |
| FLHMNOBM_67 | 2736 | 35364 | True | Siphoviridae | VOG7438, VOG1047, VOG0021, VOG0026, VOG4606, VOG0327, VOG4548, VOG0198, VOG6154, VOG4581, VOG4571, VOG4544, VOG4013, VOG4556, VOG4573, VOG4553, VOG0204, VOG4589, VOG0641, VOG9502, VOG0221, VOG0221, VOG4571 |
Phigaro v2.4.0 (Database: Jan. 2024 release)