Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| KAKNLNKC_72 | 2947 | 2753 | CspA | 4.60e-28 | cold shock protein | 83.08 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KAKNLNKC_7 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_8 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_9 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_10 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_11 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_12 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_13 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_14 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_15 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_16 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_17 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_18 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_19 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_20 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_21 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_22 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_23 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_24 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_25 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_26 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_27 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_28 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_29 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_30 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_31 | 1.0 | 0.0 | 1.0 |
| KAKNLNKC_32 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_33 | 1.0 | 0.0 | 1.0 |
| KAKNLNKC_34 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_35 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_36 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_37 | 1.0 | 0.0 | 1.0 |
| KAKNLNKC_38 | 1.0 | 0.0 | 1.0 |
| KAKNLNKC_39 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_40 | 1.0 | 0.0 | 1.0 |
| KAKNLNKC_41 | 1.0 | 0.0 | 1.0 |
| KAKNLNKC_42 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_43 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_44 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_45 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_46 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_47 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_48 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_49 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_50 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_51 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_52 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_53 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_54 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_55 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_56 | 1.0 | 0.0 | 1.0 |
| KAKNLNKC_57 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_58 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_59 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_60 | 1.0 | 0.0 | 1.0 |
| KAKNLNKC_61 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_62 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_63 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_64 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_65 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_66 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_68 | 1.0 | 0.0 | 1.0 |
| KAKNLNKC_69 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_70 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_71 | 1.0 | 0.0 | 1.0 |
| KAKNLNKC_72 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_73 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_74 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_75 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_76 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_77 | 1.0 | 0.0 | 1.0 |
| KAKNLNKC_79 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_81 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_82 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_83 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_84 | 1.0 | 0.0 | 1.0 |
| KAKNLNKC_85 | 1.0 | 0.0 | 1.0 |
| KAKNLNKC_86 | 1.0 | 0.0 | 1.0 |
| KAKNLNKC_87 | 1.0 | 0.0 | 1.0 |
| KAKNLNKC_88 | 1.0 | 0.0 | 1.0 |
| KAKNLNKC_89 | 1.0 | 0.0 | 1.0 |
| KAKNLNKC_90 | 1.0 | 0.0 | 1.0 |
| KAKNLNKC_91 | 1.0 | 0.0 | 1.0 |
| KAKNLNKC_94 | 0.0 | 1.0 | 0.0 |
| KAKNLNKC_105 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KAKNLNKC_39 | 3016 | 35795 | False | Siphoviridae | VOG8904, VOG4824, VOG0703, VOG1637, VOG4856, VOG4904, VOG3462, VOG0801, VOG6163, VOG9471, VOG2225, VOG4586, VOG0704, VOG0539, VOG4589, VOG0204, VOG4553, VOG4568, VOG4556, VOG0202, VOG4544, VOG4581, VOG4841, VOG0866, VOG0198, VOG7111, VOG6140, VOG0686, VOG5317, VOG5280, VOG5562, VOG5998, VOG5278, VOG0275 |
Phigaro v2.4.0 (Database: Jan. 2024 release)