Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| JGFAONFK_52 | 90032 | 90226 | CspA | 5.64e-28 | cold shock protein | 83.08 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JGFAONFK_1 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_3 | 1.0 | 0.0 | 1.0 |
| JGFAONFK_4 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_6 | 1.0 | 0.0 | 1.0 |
| JGFAONFK_7 | 1.0 | 0.0 | 1.0 |
| JGFAONFK_8 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_9 | 1.0 | 0.0 | 1.0 |
| JGFAONFK_10 | 1.0 | 0.0 | 1.0 |
| JGFAONFK_11 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_12 | 1.0 | 0.0 | 1.0 |
| JGFAONFK_13 | 1.0 | 0.0 | 1.0 |
| JGFAONFK_14 | 1.0 | 0.0 | 1.0 |
| JGFAONFK_15 | 1.0 | 0.0 | 1.0 |
| JGFAONFK_16 | 1.0 | 0.0 | 1.0 |
| JGFAONFK_17 | 1.0 | 0.0 | 1.0 |
| JGFAONFK_18 | 1.0 | 0.0 | 1.0 |
| JGFAONFK_22 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_33 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_44 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_46 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_47 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_48 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_49 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_50 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_51 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_52 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_53 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_54 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_55 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_56 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_57 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_58 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_59 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_60 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_61 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_62 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_63 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_64 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_65 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_66 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_67 | 1.0 | 0.0 | 1.0 |
| JGFAONFK_68 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_69 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_70 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_71 | 1.0 | 0.0 | 1.0 |
| JGFAONFK_72 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_73 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_74 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_75 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_76 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_77 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_78 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_79 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_80 | 1.0 | 0.0 | 1.0 |
| JGFAONFK_81 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_82 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_83 | 1.0 | 0.0 | 1.0 |
| JGFAONFK_84 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_85 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_86 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_87 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_88 | 1.0 | 0.0 | 1.0 |
| JGFAONFK_89 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_90 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_91 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_92 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_93 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_94 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_95 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_96 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_97 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_98 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_99 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_100 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_101 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_102 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_103 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_104 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_105 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_106 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_107 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_108 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_109 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_110 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_111 | 1.0 | 0.0 | 1.0 |
| JGFAONFK_112 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_113 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_114 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_115 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_116 | 1.0 | 0.0 | 1.0 |
| JGFAONFK_117 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_118 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_119 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_120 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_121 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_122 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_123 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_124 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_125 | 1.0 | 0.0 | 1.0 |
| JGFAONFK_126 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_127 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_128 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_129 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_130 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_131 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_133 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_134 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_135 | 1.0 | 0.0 | 1.0 |
| JGFAONFK_137 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_138 | 0.0 | 1.0 | 0.0 |
| JGFAONFK_139 | 1.0 | 0.0 | 1.0 |
| JGFAONFK_140 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JGFAONFK_22 | 5161 | 32917 | False | Siphoviridae | VOG5070, VOG3463, VOG3462, VOG0801, VOG6163, VOG0725, VOG0799, VOG0724, VOG1353, VOG10539, VOG4713, VOG1329, VOG4555, VOG4564, VOG0720, VOG10227, VOG3699, VOG0866, VOG0996, VOG0198, VOG4693 |
| JGFAONFK_53 | 12068 | 21342 | False | Myoviridae | VOG4564, VOG0226, VOG10104, VOG0384, VOG0382, VOG0083 |
Phigaro v2.4.0 (Database: Jan. 2024 release)