Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| CJBLCCNN_86 | 66484 | 66678 | CspA | 4.26e-28 | cold shock protein | 83.08 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| CJBLCCNN_10 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_11 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_12 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_13 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_14 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_15 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_16 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_17 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_18 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_19 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_20 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_21 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_22 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_23 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_24 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_25 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_26 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_27 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_28 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_29 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_30 | 1.0 | 0.0 | 1.0 |
| CJBLCCNN_31 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_32 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_33 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_34 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_35 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_36 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_37 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_38 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_39 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_40 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_41 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_42 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_43 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_44 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_45 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_46 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_47 | 1.0 | 0.0 | 1.0 |
| CJBLCCNN_48 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_49 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_50 | 1.0 | 0.0 | 1.0 |
| CJBLCCNN_51 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_52 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_53 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_54 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_55 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_56 | 1.0 | 0.0 | 1.0 |
| CJBLCCNN_57 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_58 | 1.0 | 0.0 | 1.0 |
| CJBLCCNN_59 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_60 | 1.0 | 0.0 | 1.0 |
| CJBLCCNN_61 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_62 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_63 | 1.0 | 0.0 | 1.0 |
| CJBLCCNN_64 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_65 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_66 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_67 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_68 | 1.0 | 0.0 | 1.0 |
| CJBLCCNN_69 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_70 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_71 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_72 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_73 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_74 | 1.0 | 0.0 | 1.0 |
| CJBLCCNN_75 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_76 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_77 | 1.0 | 0.0 | 1.0 |
| CJBLCCNN_78 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_80 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_81 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_82 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_83 | 1.0 | 0.0 | 1.0 |
| CJBLCCNN_84 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_85 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_86 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_87 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_88 | 1.0 | 0.0 | 1.0 |
| CJBLCCNN_89 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_90 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_92 | 1.0 | 0.0 | 1.0 |
| CJBLCCNN_93 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_94 | 1.0 | 0.0 | 1.0 |
| CJBLCCNN_95 | 1.0 | 0.0 | 1.0 |
| CJBLCCNN_96 | 1.0 | 0.0 | 1.0 |
| CJBLCCNN_97 | 0.0 | 1.0 | 0.0 |
| CJBLCCNN_98 | 1.0 | 0.0 | 1.0 |
| CJBLCCNN_99 | 1.0 | 0.0 | 1.0 |
| CJBLCCNN_100 | 1.0 | 0.0 | 1.0 |
| CJBLCCNN_108 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| CJBLCCNN_16 | 22449 | 45796 | False | Siphoviridae | VOG0198, VOG0866, VOG0866, VOG0195, VOG0822, VOG4841, VOG4581, VOG1886, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG6163, VOG0801, VOG3462, VOG3463 |
| CJBLCCNN_20 | 68932 | 74095 | False | Unknown | VOG4552, VOG4237, VOG5532, VOG9667, VOG0275 |
| CJBLCCNN_29 | 16544 | 20777 | True | Unknown | VOG0221, VOG0221, VOG0221, VOG9409, VOG0641, VOG4589 |
| CJBLCCNN_31 | 54461 | 81472 | False | Siphoviridae | VOG5976, VOG4824, VOG0703, VOG8917, VOG5008, VOG5070, VOG3462, VOG0801, VOG4545, VOG0800, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG4711, VOG4555, VOG5822, VOG6028, VOG10904, VOG4564, VOG0720, VOG7734, VOG3699, VOG0198, VOG6140, VOG3468, VOG5141, VOG1183, VOG0686, VOG3307 |
| CJBLCCNN_97 | 8124 | 19083 | False | Siphoviridae | VOG4602, VOG8520, VOG8520, VOG8214, VOG6459, VOG9469, VOG0707, VOG3478, VOG5692, VOG4955, VOG0226, VOG0514, VOG4799, VOG0686, VOG0686, VOG1183, VOG4693, VOG6495, VOG4010, VOG9669 |
| CJBLCCNN_97 | 43117 | 62478 | False | Siphoviridae | VOG0866, VOG4841, VOG4581, VOG4544, VOG4556, VOG4573, VOG4553, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG4545, VOG0801, VOG3462, VOG3463 |
Phigaro v2.4.0 (Database: Jan. 2024 release)