Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| NLFBOJIL_104 | 3006 | 2812 | CspA | 3.05e-28 | cold shock protein | 83.08 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NLFBOJIL_1 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_2 | 1.0 | 0.0 | 1.0 |
| NLFBOJIL_3 | 1.0 | 0.0 | 1.0 |
| NLFBOJIL_4 | 1.0 | 0.0 | 1.0 |
| NLFBOJIL_5 | 1.0 | 0.0 | 1.0 |
| NLFBOJIL_6 | 1.0 | 0.0 | 1.0 |
| NLFBOJIL_7 | 1.0 | 0.0 | 1.0 |
| NLFBOJIL_11 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_22 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_30 | 1.0 | 0.0 | 1.0 |
| NLFBOJIL_31 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_32 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_33 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_34 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_35 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_36 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_37 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_38 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_39 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_40 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_41 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_42 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_43 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_44 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_45 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_46 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_47 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_48 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_49 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_50 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_51 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_52 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_53 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_54 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_55 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_56 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_57 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_58 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_59 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_60 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_61 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_62 | 1.0 | 0.0 | 1.0 |
| NLFBOJIL_63 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_64 | 1.0 | 0.0 | 1.0 |
| NLFBOJIL_65 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_66 | 1.0 | 0.0 | 1.0 |
| NLFBOJIL_67 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_68 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_69 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_70 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_71 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_72 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_73 | 1.0 | 0.0 | 1.0 |
| NLFBOJIL_74 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_75 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_76 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_77 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_78 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_79 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_80 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_81 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_82 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_83 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_84 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_85 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_86 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_87 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_88 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_89 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_90 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_91 | 1.0 | 0.0 | 1.0 |
| NLFBOJIL_92 | 1.0 | 0.0 | 1.0 |
| NLFBOJIL_93 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_94 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_95 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_96 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_97 | 1.0 | 0.0 | 1.0 |
| NLFBOJIL_98 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_99 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_100 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_101 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_102 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_103 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_104 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_105 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_107 | 1.0 | 0.0 | 1.0 |
| NLFBOJIL_108 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_109 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_110 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_111 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_112 | 1.0 | 0.0 | 1.0 |
| NLFBOJIL_113 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_114 | 1.0 | 0.0 | 1.0 |
| NLFBOJIL_115 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_116 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_117 | 1.0 | 0.0 | 1.0 |
| NLFBOJIL_118 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_120 | 1.0 | 0.0 | 1.0 |
| NLFBOJIL_121 | 0.0 | 1.0 | 0.0 |
| NLFBOJIL_122 | 1.0 | 0.0 | 1.0 |
| NLFBOJIL_123 | 1.0 | 0.0 | 1.0 |
| NLFBOJIL_124 | 1.0 | 0.0 | 1.0 |
| NLFBOJIL_125 | 1.0 | 0.0 | 1.0 |
| NLFBOJIL_126 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NLFBOJIL_30 | 5367 | 37401 | False | Siphoviridae | VOG0703, VOG1637, VOG8833, VOG5070, VOG3463, VOG3462, VOG0801, VOG4545, VOG0209, VOG4586, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG0202, VOG1886, VOG4581, VOG4841, VOG0376, VOG4373, VOG0198, VOG9500, VOG6495, VOG0686, VOG0327, VOG4609, VOG4632, VOG6545, VOG0322, VOG4548, VOG0321, VOG6450, VOG0979 |
| NLFBOJIL_32 | 6094 | 31142 | False | Siphoviridae | VOG4606, VOG0198, VOG4570, VOG1345, VOG4841, VOG4581, VOG1886, VOG4556, VOG4568, VOG0204, VOG0205, VOG0207, VOG4586, VOG0209, VOG0660, VOG4052, VOG0801, VOG10972, VOG4856, VOG1637, VOG0054 |
Phigaro v2.4.0 (Database: Jan. 2024 release)