Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 1 | 2.24 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IPBLKJJN_125 | 4682 | 5167 | lnuA | ARO:3002835 | lnuA | 97.52 | 100.00 | M14039.1 |
| IPBLKJJN_88 | 2952 | 4871 | tet(W) | ARO:3000194 | tet(W) | 97.18 | 100.00 | AJ222769.3 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| IPBLKJJN_88 | 2952 | 4871 | tet(W) | Doxycycline, Tetracycline, Minocycline | 99.11 | 100.00 | FN396364 |
| IPBLKJJN_125 | 4682 | 5167 | lnu(A) | Lincomycin | 98.77 | 100.00 | M14039 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| IPBLKJJN_125 | 4685 | 5167 | lnu(A) | lincosamide nucleotidyltransferase Lnu(A) | EXACTX | 100.00 | 100.00 | WP_001829870.1 |
| IPBLKJJN_88 | 2952 | 4868 | tet(W) | tetracycline resistance ribosomal protection protein Tet(W) | EXACTX | 100.00 | 100.00 | WP_000691721.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IPBLKJJN_33 | 2950 | 2756 | CspA | 2.42e-28 | cold shock protein | 83.08 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IPBLKJJN_1 | 1.0 | 0.0 | 1.0 |
| IPBLKJJN_2 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_3 | 1.0 | 0.0 | 1.0 |
| IPBLKJJN_4 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_5 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_6 | 1.0 | 0.0 | 1.0 |
| IPBLKJJN_7 | 1.0 | 0.0 | 1.0 |
| IPBLKJJN_8 | 1.0 | 0.0 | 1.0 |
| IPBLKJJN_11 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_12 | 1.0 | 0.0 | 1.0 |
| IPBLKJJN_13 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_14 | 1.0 | 0.0 | 1.0 |
| IPBLKJJN_15 | 1.0 | 0.0 | 1.0 |
| IPBLKJJN_16 | 1.0 | 0.0 | 1.0 |
| IPBLKJJN_17 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_18 | 1.0 | 0.0 | 1.0 |
| IPBLKJJN_19 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_21 | 1.0 | 0.0 | 1.0 |
| IPBLKJJN_22 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_23 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_24 | 1.0 | 0.0 | 1.0 |
| IPBLKJJN_25 | 1.0 | 0.0 | 1.0 |
| IPBLKJJN_26 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_33 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_44 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_52 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_53 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_54 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_55 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_56 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_57 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_58 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_59 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_60 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_61 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_62 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_63 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_64 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_65 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_66 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_67 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_68 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_69 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_70 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_71 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_72 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_73 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_74 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_75 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_76 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_77 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_78 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_79 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_80 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_81 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_82 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_83 | 1.0 | 0.0 | 1.0 |
| IPBLKJJN_84 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_85 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_86 | 1.0 | 0.0 | 1.0 |
| IPBLKJJN_87 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_88 | 1.0 | 0.0 | 1.0 |
| IPBLKJJN_89 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_90 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_91 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_92 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_93 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_94 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_95 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_96 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_97 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_98 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_99 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_100 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_101 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_102 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_103 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_104 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_105 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_106 | 1.0 | 0.0 | 1.0 |
| IPBLKJJN_107 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_108 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_109 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_110 | 1.0 | 0.0 | 1.0 |
| IPBLKJJN_111 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_112 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_113 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_114 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_115 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_116 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_117 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_118 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_119 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_120 | 1.0 | 0.0 | 1.0 |
| IPBLKJJN_121 | 1.0 | 0.0 | 1.0 |
| IPBLKJJN_122 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_123 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_124 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_125 | 1.0 | 0.0 | 1.0 |
| IPBLKJJN_126 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_127 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_128 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_129 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_130 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_131 | 1.0 | 0.0 | 1.0 |
| IPBLKJJN_132 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_133 | 1.0 | 0.0 | 1.0 |
| IPBLKJJN_134 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_135 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_136 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_137 | 1.0 | 0.0 | 1.0 |
| IPBLKJJN_138 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_139 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_140 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_141 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_143 | 1.0 | 0.0 | 1.0 |
| IPBLKJJN_144 | 0.0 | 1.0 | 0.0 |
| IPBLKJJN_145 | 1.0 | 0.0 | 1.0 |
| IPBLKJJN_146 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IPBLKJJN_58 | 119293 | 158686 | False | Siphoviridae | VOG3711, VOG1638, VOG0862, VOG8520, VOG5063, VOG4552, VOG0979, VOG6450, VOG11077, VOG4925, VOG5278, VOG0283, VOG0514, VOG0226, VOG4799, VOG0189, VOG0586, VOG3307, VOG8424, VOG4693, VOG0198, VOG4373, VOG0376, VOG3699, VOG10227, VOG0720, VOG4564, VOG4555, VOG4711, VOG4713, VOG8555, VOG4329, VOG0725, VOG0817, VOG1637, VOG0801, VOG3462, VOG4856, VOG10593, VOG8917, VOG0703 |
| IPBLKJJN_80 | 5786 | 35659 | False | Siphoviridae | VOG10593, VOG3462, VOG0801, VOG6163, VOG9471, VOG2225, VOG4586, VOG0704, VOG0539, VOG4589, VOG0204, VOG4553, VOG4568, VOG4556, VOG4544, VOG4581, VOG4841, VOG0866, VOG0531, VOG5413, VOG0198, VOG0686, VOG0638, VOG5317, VOG5280, VOG5562, VOG5998, VOG5278, VOG0275 |
Phigaro v2.4.0 (Database: Jan. 2024 release)