Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| ANHCKOFG_46 | 73134 | 73328 | CspA | 4.73e-28 | cold shock protein | 83.08 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| ANHCKOFG_11 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_15 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_16 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_17 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_18 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_19 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_20 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_21 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_22 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_23 | 1.0 | 0.0 | 1.0 |
| ANHCKOFG_24 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_25 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_26 | 1.0 | 0.0 | 1.0 |
| ANHCKOFG_27 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_28 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_29 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_30 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_31 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_32 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_33 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_34 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_35 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_36 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_37 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_38 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_39 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_40 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_41 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_42 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_43 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_44 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_45 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_46 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_47 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_48 | 1.0 | 0.0 | 1.0 |
| ANHCKOFG_49 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_50 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_51 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_52 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_53 | 1.0 | 0.0 | 1.0 |
| ANHCKOFG_54 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_55 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_56 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_57 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_58 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_59 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_60 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_61 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_62 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_63 | 1.0 | 0.0 | 1.0 |
| ANHCKOFG_64 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_65 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_66 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_67 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_68 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_69 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_70 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_71 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_72 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_73 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_74 | 1.0 | 0.0 | 1.0 |
| ANHCKOFG_75 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_76 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_77 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_78 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_79 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_80 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_81 | 1.0 | 0.0 | 1.0 |
| ANHCKOFG_82 | 1.0 | 0.0 | 1.0 |
| ANHCKOFG_83 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_84 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_85 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_86 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_87 | 1.0 | 0.0 | 1.0 |
| ANHCKOFG_88 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_90 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_91 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_92 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_93 | 1.0 | 0.0 | 1.0 |
| ANHCKOFG_94 | 1.0 | 0.0 | 1.0 |
| ANHCKOFG_95 | 1.0 | 0.0 | 1.0 |
| ANHCKOFG_96 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_99 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_100 | 1.0 | 0.0 | 1.0 |
| ANHCKOFG_101 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_102 | 1.0 | 0.0 | 1.0 |
| ANHCKOFG_103 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_104 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_105 | 1.0 | 0.0 | 1.0 |
| ANHCKOFG_106 | 1.0 | 0.0 | 1.0 |
| ANHCKOFG_107 | 1.0 | 0.0 | 1.0 |
| ANHCKOFG_108 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_109 | 0.0 | 1.0 | 0.0 |
| ANHCKOFG_110 | 1.0 | 0.0 | 1.0 |
| ANHCKOFG_112 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| ANHCKOFG_16 | 9568 | 48291 | False | Siphoviridae | VOG0054, VOG1637, VOG9998, VOG4705, VOG4334, VOG4856, VOG9997, VOG1050, VOG10972, VOG3462, VOG0801, VOG4545, VOG0725, VOG0799, VOG0724, VOG4713, VOG1329, VOG4555, VOG4564, VOG0720, VOG10227, VOG3699, VOG7428, VOG0198, VOG4039, VOG4693, VOG1183, VOG8065, VOG8916, VOG9669, VOG5229, VOG4799, VOG0186, VOG1309, VOG7341 |
| ANHCKOFG_23 | 1806 | 35692 | False | Siphoviridae | VOG0641, VOG0648, VOG9888, VOG10608, VOG1335, VOG6163, VOG1334, VOG1333, VOG4634, VOG0704, VOG1900, VOG1330, VOG4713, VOG1887, VOG3434, VOG4555, VOG4564, VOG0720, VOG4544, VOG0796, VOG9503, VOG0689, VOG9888, VOG0198, VOG4693, VOG1183, VOG4552, VOG5133, VOG0189, VOG4566, VOG0514, VOG6545, VOG0322, VOG0535, VOG11077 |
| ANHCKOFG_26 | 5097 | 32051 | False | Siphoviridae | VOG0703, VOG8917, VOG9657, VOG4856, VOG3463, VOG3462, VOG0801, VOG8263, VOG0473, VOG0209, VOG0207, VOG0205, VOG0204, VOG4553, VOG4573, VOG4556, VOG1886, VOG0866, VOG9312, VOG4581, VOG4841, VOG0866, VOG10604, VOG0198, VOG7111, VOG6140, VOG0686 |
Phigaro v2.4.0 (Database: Jan. 2024 release)