Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BIDOOJFL_103 | 6075 | 5881 | CspA | 4.72e-29 | cold shock protein | 83.08 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BIDOOJFL_1 | 1.0 | 0.0 | 1.0 |
| BIDOOJFL_2 | 1.0 | 0.0 | 1.0 |
| BIDOOJFL_3 | 1.0 | 0.0 | 1.0 |
| BIDOOJFL_4 | 1.0 | 0.0 | 1.0 |
| BIDOOJFL_5 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_6 | 1.0 | 0.0 | 1.0 |
| BIDOOJFL_7 | 1.0 | 0.0 | 1.0 |
| BIDOOJFL_8 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_10 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_11 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_12 | 1.0 | 0.0 | 1.0 |
| BIDOOJFL_13 | 1.0 | 0.0 | 1.0 |
| BIDOOJFL_14 | 1.0 | 0.0 | 1.0 |
| BIDOOJFL_16 | 1.0 | 0.0 | 1.0 |
| BIDOOJFL_22 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_33 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_44 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_46 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_47 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_48 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_49 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_50 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_51 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_52 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_53 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_54 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_55 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_56 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_57 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_58 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_59 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_60 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_61 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_62 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_63 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_64 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_65 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_66 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_67 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_68 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_69 | 1.0 | 0.0 | 1.0 |
| BIDOOJFL_70 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_71 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_72 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_73 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_74 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_75 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_76 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_77 | 1.0 | 0.0 | 1.0 |
| BIDOOJFL_78 | 1.0 | 0.0 | 1.0 |
| BIDOOJFL_79 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_80 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_81 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_82 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_83 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_84 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_85 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_86 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_87 | 1.0 | 0.0 | 1.0 |
| BIDOOJFL_88 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_89 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_90 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_91 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_92 | 1.0 | 0.0 | 1.0 |
| BIDOOJFL_93 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_94 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_95 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_96 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_97 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_98 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_99 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_100 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_101 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_102 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_103 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_104 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_105 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_106 | 1.0 | 0.0 | 1.0 |
| BIDOOJFL_107 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_108 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_109 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_110 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_111 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_112 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_113 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_114 | 1.0 | 0.0 | 1.0 |
| BIDOOJFL_115 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_116 | 1.0 | 0.0 | 1.0 |
| BIDOOJFL_117 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_118 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_119 | 1.0 | 0.0 | 1.0 |
| BIDOOJFL_120 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_121 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_122 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_124 | 1.0 | 0.0 | 1.0 |
| BIDOOJFL_125 | 1.0 | 0.0 | 1.0 |
| BIDOOJFL_126 | 1.0 | 0.0 | 1.0 |
| BIDOOJFL_127 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_128 | 1.0 | 0.0 | 1.0 |
| BIDOOJFL_129 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_130 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_131 | 1.0 | 0.0 | 1.0 |
| BIDOOJFL_132 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_133 | 1.0 | 0.0 | 1.0 |
| BIDOOJFL_135 | 1.0 | 0.0 | 1.0 |
| BIDOOJFL_136 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_137 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_139 | 0.0 | 1.0 | 0.0 |
| BIDOOJFL_140 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BIDOOJFL_33 | 11059 | 45085 | False | Siphoviridae | VOG0703, VOG1637, VOG5070, VOG9078, VOG3462, VOG3462, VOG0801, VOG4545, VOG0800, VOG0725, VOG0799, VOG0724, VOG5660, VOG0723, VOG4713, VOG4711, VOG4555, VOG4564, VOG0720, VOG10227, VOG4544, VOG10904, VOG0796, VOG0376, VOG4373, VOG0198, VOG0536, VOG5133, VOG0189, VOG4799, VOG0226, VOG0283, VOG9708, VOG5420, VOG4552, VOG6495, VOG9667, VOG4602 |
Phigaro v2.4.0 (Database: Jan. 2024 release)