Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| GEPDGMEL_103 | 10793 | 10987 | CspA | 1.04e-28 | cold shock protein | 84.61 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GEPDGMEL_11 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_17 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_28 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_39 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_42 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_43 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_44 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_45 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_46 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_47 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_48 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_49 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_50 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_51 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_52 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_53 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_54 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_55 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_56 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_57 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_58 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_59 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_60 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_61 | 1.0 | 0.0 | 1.0 |
| GEPDGMEL_62 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_63 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_64 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_65 | 1.0 | 0.0 | 1.0 |
| GEPDGMEL_66 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_67 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_68 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_69 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_70 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_71 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_72 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_73 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_74 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_75 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_76 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_77 | 1.0 | 0.0 | 1.0 |
| GEPDGMEL_78 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_79 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_80 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_81 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_82 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_83 | 1.0 | 0.0 | 1.0 |
| GEPDGMEL_84 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_85 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_86 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_87 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_88 | 1.0 | 0.0 | 1.0 |
| GEPDGMEL_89 | 1.0 | 0.0 | 1.0 |
| GEPDGMEL_90 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_91 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_92 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_93 | 1.0 | 0.0 | 1.0 |
| GEPDGMEL_94 | 1.0 | 0.0 | 1.0 |
| GEPDGMEL_95 | 1.0 | 0.0 | 1.0 |
| GEPDGMEL_97 | 1.0 | 0.0 | 1.0 |
| GEPDGMEL_98 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_99 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_100 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_101 | 1.0 | 0.0 | 1.0 |
| GEPDGMEL_102 | 1.0 | 0.0 | 1.0 |
| GEPDGMEL_103 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_104 | 1.0 | 0.0 | 1.0 |
| GEPDGMEL_105 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_107 | 1.0 | 0.0 | 1.0 |
| GEPDGMEL_108 | 1.0 | 0.0 | 1.0 |
| GEPDGMEL_109 | 1.0 | 0.0 | 1.0 |
| GEPDGMEL_110 | 1.0 | 0.0 | 1.0 |
| GEPDGMEL_111 | 1.0 | 0.0 | 1.0 |
| GEPDGMEL_112 | 1.0 | 0.0 | 1.0 |
| GEPDGMEL_114 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_115 | 1.0 | 0.0 | 1.0 |
| GEPDGMEL_125 | 0.0 | 1.0 | 0.0 |
| GEPDGMEL_133 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)