Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BPLELJHN_62 | 18259 | 18453 | CspA | 4.66e-28 | cold shock protein | 83.08 | 98.48 | CAA62903 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BPLELJHN_1 | 0.0 | 1.0 | 0.0 |
| BPLELJHN_2 | 0.0 | 1.0 | 0.0 |
| BPLELJHN_3 | 0.0 | 1.0 | 0.0 |
| BPLELJHN_4 | 0.0 | 1.0 | 0.0 |
| BPLELJHN_5 | 0.0 | 1.0 | 0.0 |
| BPLELJHN_6 | 0.0 | 1.0 | 0.0 |
| BPLELJHN_7 | 0.0 | 1.0 | 0.0 |
| BPLELJHN_8 | 0.0 | 1.0 | 0.0 |
| BPLELJHN_9 | 0.0 | 1.0 | 0.0 |
| BPLELJHN_10 | 0.0 | 1.0 | 0.0 |
| BPLELJHN_11 | 0.0 | 1.0 | 0.0 |
| BPLELJHN_12 | 0.0 | 1.0 | 0.0 |
| BPLELJHN_13 | 0.0 | 1.0 | 0.0 |
| BPLELJHN_14 | 0.0 | 1.0 | 0.0 |
| BPLELJHN_15 | 0.0 | 1.0 | 0.0 |
| BPLELJHN_16 | 0.0 | 1.0 | 0.0 |
| BPLELJHN_17 | 0.0 | 1.0 | 0.0 |
| BPLELJHN_18 | 1.0 | 0.0 | 1.0 |
| BPLELJHN_19 | 0.0 | 1.0 | 0.0 |
| BPLELJHN_20 | 0.0 | 1.0 | 0.0 |
| BPLELJHN_21 | 0.0 | 1.0 | 0.0 |
| BPLELJHN_22 | 0.0 | 1.0 | 0.0 |
| BPLELJHN_23 | 1.0 | 0.0 | 1.0 |
| BPLELJHN_24 | 0.0 | 1.0 | 0.0 |
| BPLELJHN_25 | 0.0 | 1.0 | 0.0 |
| BPLELJHN_26 | 0.0 | 1.0 | 0.0 |
| BPLELJHN_27 | 1.0 | 0.0 | 1.0 |
| BPLELJHN_28 | 1.0 | 0.0 | 1.0 |
| BPLELJHN_29 | 0.0 | 1.0 | 0.0 |
| BPLELJHN_31 | 0.0 | 1.0 | 0.0 |
| BPLELJHN_32 | 1.0 | 0.0 | 1.0 |
| BPLELJHN_33 | 0.0 | 1.0 | 0.0 |
| BPLELJHN_35 | 1.0 | 0.0 | 1.0 |
| BPLELJHN_36 | 1.0 | 0.0 | 1.0 |
| BPLELJHN_43 | 0.0 | 1.0 | 0.0 |
| BPLELJHN_53 | 0.0 | 1.0 | 0.0 |
| BPLELJHN_59 | 0.0 | 1.0 | 0.0 |
| BPLELJHN_60 | 0.0 | 1.0 | 0.0 |
| BPLELJHN_61 | 0.0 | 1.0 | 0.0 |
| BPLELJHN_62 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| BPLELJHN_7 | 7828 | 19631 | False | Myoviridae / Siphoviridae | VOG4711, VOG10914, VOG4564, VOG0720, VOG4544, VOG0796, VOG4972, VOG0198, VOG4693, VOG5341, VOG1183, VOG8065 |
| BPLELJHN_7 | 22424 | 26689 | False | Siphoviridae | VOG0189, VOG4566, VOG0226, VOG0514, VOG0283, VOG0535 |
| BPLELJHN_43 | 117808 | 121412 | False | Unknown | VOG0226, VOG10104 |
Phigaro v2.4.0 (Database: Jan. 2024 release)