Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MINALECP_35 | 83854 | 84417 | lnuC | ARO:3002837 | lnuC | 98.17 | 114.02 | AY928180.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| MINALECP_35 | 83854 | 84348 | lnu(C) | Lincomycin | 99.19 | 100.00 | AY928180 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MINALECP_35 | 83857 | 84348 | lnu(C) | lincosamide nucleotidyltransferase Lnu(C) | BLASTX | 98.17 | 100.00 | WP_063851341.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MINALECP_1 | 0.0 | 1.0 | 0.0 |
| MINALECP_2 | 0.0 | 1.0 | 0.0 |
| MINALECP_3 | 0.0 | 1.0 | 0.0 |
| MINALECP_4 | 0.0 | 1.0 | 0.0 |
| MINALECP_5 | 0.0 | 1.0 | 0.0 |
| MINALECP_6 | 0.0 | 1.0 | 0.0 |
| MINALECP_7 | 0.0 | 1.0 | 0.0 |
| MINALECP_8 | 0.0 | 1.0 | 0.0 |
| MINALECP_9 | 0.0 | 1.0 | 0.0 |
| MINALECP_10 | 0.0 | 1.0 | 0.0 |
| MINALECP_11 | 0.0 | 1.0 | 0.0 |
| MINALECP_12 | 0.0 | 1.0 | 0.0 |
| MINALECP_13 | 0.0 | 1.0 | 0.0 |
| MINALECP_14 | 0.0 | 1.0 | 0.0 |
| MINALECP_15 | 0.0 | 1.0 | 0.0 |
| MINALECP_16 | 0.0 | 1.0 | 0.0 |
| MINALECP_17 | 0.0 | 1.0 | 0.0 |
| MINALECP_18 | 0.0 | 1.0 | 0.0 |
| MINALECP_19 | 0.0 | 1.0 | 0.0 |
| MINALECP_20 | 0.0 | 1.0 | 0.0 |
| MINALECP_21 | 0.0 | 1.0 | 0.0 |
| MINALECP_22 | 0.0 | 1.0 | 0.0 |
| MINALECP_23 | 0.0 | 1.0 | 0.0 |
| MINALECP_24 | 0.0 | 1.0 | 0.0 |
| MINALECP_25 | 0.0 | 1.0 | 0.0 |
| MINALECP_26 | 0.0 | 1.0 | 0.0 |
| MINALECP_27 | 0.0 | 1.0 | 0.0 |
| MINALECP_28 | 0.0 | 1.0 | 0.0 |
| MINALECP_29 | 0.0 | 1.0 | 0.0 |
| MINALECP_30 | 0.0 | 1.0 | 0.0 |
| MINALECP_31 | 0.0 | 1.0 | 0.0 |
| MINALECP_32 | 1.0 | 0.0 | 1.0 |
| MINALECP_33 | 0.0 | 1.0 | 0.0 |
| MINALECP_34 | 0.0 | 1.0 | 0.0 |
| MINALECP_35 | 0.0 | 1.0 | 0.0 |
| MINALECP_36 | 0.0 | 1.0 | 0.0 |
| MINALECP_37 | 0.0 | 1.0 | 0.0 |
| MINALECP_38 | 0.0 | 1.0 | 0.0 |
| MINALECP_39 | 0.0 | 1.0 | 0.0 |
| MINALECP_40 | 0.0 | 1.0 | 0.0 |
| MINALECP_41 | 1.0 | 0.0 | 1.0 |
| MINALECP_42 | 0.0 | 1.0 | 0.0 |
| MINALECP_43 | 1.0 | 0.0 | 1.0 |
| MINALECP_44 | 0.0 | 1.0 | 0.0 |
| MINALECP_46 | 0.0 | 1.0 | 0.0 |
| MINALECP_47 | 0.0 | 1.0 | 0.0 |
| MINALECP_48 | 0.0 | 1.0 | 0.0 |
| MINALECP_49 | 1.0 | 0.0 | 1.0 |
| MINALECP_50 | 0.0 | 1.0 | 0.0 |
| MINALECP_53 | 1.0 | 0.0 | 1.0 |
| MINALECP_55 | 0.0 | 1.0 | 0.0 |
| MINALECP_56 | 0.0 | 1.0 | 0.0 |
| MINALECP_57 | 0.0 | 1.0 | 0.0 |
| MINALECP_59 | 0.0 | 1.0 | 0.0 |
| MINALECP_61 | 1.0 | 0.0 | 1.0 |
| MINALECP_62 | 1.0 | 0.0 | 1.0 |
| MINALECP_64 | 1.0 | 0.0 | 1.0 |
| MINALECP_65 | 1.0 | 0.0 | 1.0 |
| MINALECP_66 | 1.0 | 0.0 | 1.0 |
| MINALECP_71 | 0.0 | 1.0 | 0.0 |
| MINALECP_72 | 1.0 | 0.0 | 1.0 |
| MINALECP_86 | 0.0 | 1.0 | 0.0 |
| MINALECP_98 | 0.0 | 1.0 | 0.0 |
| MINALECP_105 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MINALECP_71 | 111278 | 126300 | False | Siphoviridae | VOG1356, |
Phigaro v2.4.0 (Database: Jan. 2024 release)