Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| PFFIMLED_75 | 31599 | 33179 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 87.29 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| PFFIMLED_1 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_2 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_3 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_4 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_6 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_7 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_8 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_9 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_10 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_11 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_12 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_13 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_14 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_15 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_16 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_19 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_20 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_21 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_22 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_23 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_24 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_25 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_26 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_27 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_28 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_29 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_30 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_31 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_32 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_33 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_34 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_35 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_36 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_37 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_38 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_39 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_40 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_41 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_42 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_43 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_44 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_45 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_46 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_47 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_48 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_49 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_50 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_51 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_52 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_53 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_54 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_55 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_56 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_57 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_58 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_59 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_60 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_61 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_62 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_63 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_64 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_65 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_66 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_67 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_68 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_69 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_70 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_71 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_72 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_73 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_74 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_75 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_76 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_77 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_78 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_79 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_80 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_81 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_82 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_83 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_84 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_85 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_86 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_87 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_88 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_89 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_90 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_91 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_92 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_93 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_94 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_95 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_96 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_97 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_98 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_99 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_100 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_101 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_102 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_103 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_104 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_105 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_106 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_107 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_109 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_110 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_111 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_112 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_113 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_114 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_115 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_116 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_117 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_118 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_119 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_120 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_121 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_122 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_123 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_124 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_125 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_126 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_127 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_128 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_129 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_130 | 0.0 | 1.0 | 0.0 |
| PFFIMLED_131 | 1.0 | 0.0 | 1.0 |
| PFFIMLED_133 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| PFFIMLED_38 | 139312 | 154055 | False | Siphoviridae | VOG5096, |
| PFFIMLED_72 | 7693 | 19827 | False | Myoviridae | VOG4572, |
Phigaro v2.4.0 (Database: Jan. 2024 release)