Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 1 | 1.41 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EBGCAJNG_43 | 130903 | 131868 | CfxA2 | ARO:3003002 | CfxA2 | 100.00 | 100.00 | AF118110.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| EBGCAJNG_43 | 130903 | 131868 | cfxA3 | Ampicillin | 99.90 | 100.00 | AF472622 |
| EBGCAJNG_43 | 130903 | 131868 | cfxA4 | Unknown Beta-lactam | 99.90 | 100.00 | AY769933 |
| EBGCAJNG_43 | 130903 | 131868 | cfxA5 | Unknown Beta-lactam | 99.90 | 100.00 | AY769934 |
| EBGCAJNG_43 | 130903 | 131868 | cfxA | Cefoxitin, Ampicillin | 99.90 | 100.00 | U38243 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| EBGCAJNG_43 | 130906 | 131868 | cfxA | CfxA family broad-spectrum class A beta-lactamase | EXACTX | 100.00 | 100.00 | WP_004339683.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| EBGCAJNG_2 | 240936 | 242516 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| EBGCAJNG_1 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_2 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_3 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_4 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_5 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_6 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_7 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_8 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_9 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_10 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_11 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_12 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_13 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_14 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_15 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_16 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_17 | 1.0 | 0.0 | 1.0 |
| EBGCAJNG_18 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_19 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_20 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_21 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_22 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_23 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_24 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_25 | 1.0 | 0.0 | 1.0 |
| EBGCAJNG_26 | 1.0 | 0.0 | 1.0 |
| EBGCAJNG_27 | 1.0 | 0.0 | 1.0 |
| EBGCAJNG_28 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_29 | 1.0 | 0.0 | 1.0 |
| EBGCAJNG_30 | 1.0 | 0.0 | 1.0 |
| EBGCAJNG_31 | 1.0 | 0.0 | 1.0 |
| EBGCAJNG_32 | 1.0 | 0.0 | 1.0 |
| EBGCAJNG_33 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_34 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_35 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_36 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_37 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_38 | 1.0 | 0.0 | 1.0 |
| EBGCAJNG_39 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_40 | 1.0 | 0.0 | 1.0 |
| EBGCAJNG_42 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_43 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_44 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_45 | 0.0 | 1.0 | 0.0 |
| EBGCAJNG_46 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| EBGCAJNG_1 | 109561 | 114875 | False | Unknown | VOG7407, |
Phigaro v2.4.0 (Database: Jan. 2024 release)