Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| NKBDGKHI_79 | 31599 | 33179 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 87.29 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| NKBDGKHI_135 | 943 | 1622 | repUS2 | 682 / 681 | 99.27 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| NKBDGKHI_1 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_2 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_3 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_4 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_5 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_6 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_8 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_9 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_10 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_11 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_12 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_13 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_14 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_15 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_17 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_18 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_19 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_20 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_22 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_24 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_25 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_26 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_27 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_28 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_29 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_30 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_31 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_32 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_33 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_34 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_35 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_36 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_37 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_38 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_39 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_40 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_41 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_42 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_43 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_44 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_45 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_46 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_47 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_48 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_49 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_50 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_51 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_52 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_53 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_54 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_55 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_56 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_57 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_58 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_59 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_60 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_61 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_62 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_63 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_64 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_65 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_66 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_67 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_68 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_69 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_70 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_71 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_72 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_73 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_74 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_75 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_76 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_77 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_78 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_79 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_80 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_81 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_82 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_83 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_84 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_85 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_86 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_87 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_88 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_89 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_90 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_91 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_92 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_93 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_94 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_95 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_96 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_97 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_98 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_99 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_100 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_101 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_102 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_103 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_104 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_105 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_106 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_107 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_108 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_109 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_110 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_111 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_112 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_113 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_114 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_116 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_117 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_118 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_119 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_120 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_121 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_122 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_123 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_124 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_125 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_126 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_127 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_128 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_129 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_130 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_131 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_132 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_133 | 0.0 | 1.0 | 0.0 |
| NKBDGKHI_134 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_135 | 1.0 | 0.0 | 1.0 |
| NKBDGKHI_136 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| NKBDGKHI_43 | 7693 | 19827 | False | Myoviridae | VOG4572, |
| NKBDGKHI_44 | 130547 | 138242 | False | Siphoviridae | VOG5096, |
Phigaro v2.4.0 (Database: Jan. 2024 release)