Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 1 | 2.24 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OPIAMBKF_117 | 13476 | 15401 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| OPIAMBKF_117 | 13476 | 15401 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| OPIAMBKF_144 | 156468 | 157418 | cfxA5 | Unknown Beta-lactam | 86.01 | 98.34 | AY769934 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| OPIAMBKF_117 | 13479 | 15401 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| OPIAMBKF_144 | 156466 | 157419 | cfxA | CfxA family broad-spectrum class A beta-lactamase | BLASTX | 83.33 | 99.07 | WP_004339683.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| OPIAMBKF_122 | 142313 | 140733 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| OPIAMBKF_164 | 1742 | 2421 | repUS2 | 682 / 681 | 99.27 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| OPIAMBKF_1 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_2 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_3 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_4 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_5 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_6 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_7 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_8 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_9 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_10 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_11 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_12 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_13 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_14 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_15 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_16 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_17 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_18 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_19 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_20 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_21 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_22 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_23 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_24 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_25 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_26 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_27 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_28 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_29 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_30 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_31 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_32 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_33 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_34 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_35 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_36 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_37 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_38 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_39 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_40 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_41 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_42 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_44 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_45 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_46 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_47 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_48 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_49 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_50 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_51 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_52 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_53 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_54 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_55 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_56 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_57 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_58 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_59 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_60 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_61 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_62 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_63 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_64 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_65 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_66 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_67 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_68 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_69 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_70 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_71 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_72 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_73 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_74 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_75 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_76 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_77 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_78 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_79 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_80 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_81 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_82 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_83 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_84 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_85 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_86 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_87 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_88 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_89 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_90 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_91 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_92 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_93 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_94 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_95 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_96 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_98 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_99 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_100 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_101 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_102 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_103 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_104 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_105 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_106 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_107 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_108 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_109 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_110 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_111 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_112 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_113 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_114 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_115 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_116 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_117 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_118 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_119 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_120 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_121 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_122 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_123 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_124 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_125 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_126 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_127 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_128 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_129 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_130 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_131 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_132 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_133 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_134 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_135 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_136 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_137 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_138 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_139 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_140 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_141 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_142 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_144 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_145 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_146 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_147 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_148 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_149 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_150 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_151 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_152 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_153 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_154 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_155 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_156 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_157 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_158 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_159 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_160 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_161 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_162 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_163 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_164 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_165 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_166 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_167 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_168 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_169 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_170 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_171 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_172 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_173 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_174 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_175 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_176 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_177 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_178 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_179 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_180 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_181 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_182 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_183 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_184 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_185 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_186 | 0.0 | 1.0 | 0.0 |
| OPIAMBKF_187 | 1.0 | 0.0 | 1.0 |
| OPIAMBKF_188 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| OPIAMBKF_113 | 29738 | 36537 | False | Unknown | VOG4573, |
| OPIAMBKF_115 | 12861 | 23572 | False | Unknown | VOG5821, |
| OPIAMBKF_122 | 77446 | 81451 | False | Unknown | VOG8253, |
Phigaro v2.4.0 (Database: Jan. 2024 release)