Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 3 | 0 | 1 | 3.16 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MMBFJAMP_120 | 17063 | 19036 | tet(Q) | ARO:3000191 | tet(Q) | 96.35 | 100.00 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| MMBFJAMP_184 | 1 | 632 | erm(F) | Erythromycin, Lincomycin, Clindamycin, Quinupristin, Pristinamycin IA, Virginiamycin S | 100.00 | 78.90 | M62487 |
| MMBFJAMP_120 | 17063 | 18988 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| MMBFJAMP_88 | 1179 | 2129 | cfxA5 | Unknown Beta-lactam | 86.01 | 98.34 | AY769934 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| MMBFJAMP_184 | 3 | 629 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | PARTIAL_CONTIG_ENDX | 100.00 | 78.57 | WP_063844771.1 |
| MMBFJAMP_120 | 17066 | 18988 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| MMBFJAMP_88 | 1177 | 2130 | cfxA | CfxA family broad-spectrum class A beta-lactamase | BLASTX | 83.33 | 99.07 | WP_004339683.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MMBFJAMP_174 | 142010 | 140430 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MMBFJAMP_1 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_2 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_3 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_4 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_5 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_6 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_7 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_8 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_9 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_10 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_11 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_12 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_13 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_14 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_15 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_16 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_17 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_18 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_20 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_21 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_22 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_23 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_24 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_25 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_26 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_27 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_28 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_29 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_30 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_31 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_32 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_33 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_34 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_35 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_36 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_37 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_38 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_39 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_40 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_41 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_42 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_43 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_44 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_45 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_46 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_47 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_48 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_49 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_50 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_51 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_52 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_53 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_54 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_55 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_56 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_57 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_58 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_60 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_61 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_62 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_63 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_64 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_65 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_66 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_67 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_68 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_69 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_70 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_71 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_73 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_74 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_75 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_76 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_77 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_78 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_79 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_80 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_81 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_82 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_83 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_84 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_85 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_86 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_87 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_88 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_89 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_90 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_91 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_92 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_93 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_94 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_95 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_96 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_97 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_98 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_99 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_100 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_101 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_102 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_103 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_104 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_105 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_106 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_107 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_108 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_109 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_110 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_111 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_112 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_113 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_114 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_115 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_116 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_117 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_118 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_119 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_120 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_121 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_122 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_123 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_124 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_125 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_126 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_127 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_128 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_129 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_130 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_131 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_132 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_133 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_134 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_135 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_136 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_137 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_138 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_139 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_140 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_141 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_142 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_143 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_144 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_145 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_146 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_147 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_148 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_149 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_150 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_151 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_152 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_153 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_154 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_155 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_156 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_157 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_158 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_160 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_161 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_162 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_163 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_164 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_165 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_166 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_167 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_168 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_169 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_170 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_171 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_172 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_173 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_174 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_175 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_176 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_177 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_178 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_179 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_180 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_181 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_182 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_183 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_184 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_185 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_186 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_187 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_188 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_189 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_190 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_191 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_192 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_193 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_194 | 1.0 | 0.0 | 1.0 |
| MMBFJAMP_195 | 0.0 | 1.0 | 0.0 |
| MMBFJAMP_196 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MMBFJAMP_113 | 17377 | 28088 | False | Unknown | VOG0083, |
| MMBFJAMP_117 | 3824 | 10623 | False | Unknown | VOG6366, |
| MMBFJAMP_174 | 77143 | 81148 | False | Unknown | VOG8253, |
Phigaro v2.4.0 (Database: Jan. 2024 release)