Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| FHCFICPA_75 | 31599 | 33179 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 87.29 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FHCFICPA_2 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_3 | 1.0 | 0.0 | 1.0 |
| FHCFICPA_4 | 1.0 | 0.0 | 1.0 |
| FHCFICPA_6 | 1.0 | 0.0 | 1.0 |
| FHCFICPA_7 | 1.0 | 0.0 | 1.0 |
| FHCFICPA_8 | 1.0 | 0.0 | 1.0 |
| FHCFICPA_9 | 1.0 | 0.0 | 1.0 |
| FHCFICPA_10 | 1.0 | 0.0 | 1.0 |
| FHCFICPA_11 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_12 | 1.0 | 0.0 | 1.0 |
| FHCFICPA_13 | 1.0 | 0.0 | 1.0 |
| FHCFICPA_14 | 1.0 | 0.0 | 1.0 |
| FHCFICPA_15 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_18 | 1.0 | 0.0 | 1.0 |
| FHCFICPA_19 | 1.0 | 0.0 | 1.0 |
| FHCFICPA_20 | 1.0 | 0.0 | 1.0 |
| FHCFICPA_21 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_22 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_23 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_24 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_25 | 1.0 | 0.0 | 1.0 |
| FHCFICPA_26 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_27 | 1.0 | 0.0 | 1.0 |
| FHCFICPA_28 | 1.0 | 0.0 | 1.0 |
| FHCFICPA_29 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_30 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_31 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_32 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_33 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_34 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_35 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_36 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_37 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_38 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_39 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_40 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_41 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_42 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_43 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_44 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_45 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_46 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_47 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_48 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_49 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_50 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_51 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_52 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_53 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_54 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_55 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_56 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_57 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_58 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_59 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_60 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_61 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_62 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_63 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_64 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_65 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_66 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_67 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_68 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_69 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_70 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_71 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_72 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_73 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_74 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_75 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_76 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_77 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_78 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_79 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_80 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_81 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_82 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_83 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_84 | 1.0 | 0.0 | 1.0 |
| FHCFICPA_85 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_86 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_87 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_88 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_89 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_90 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_91 | 1.0 | 0.0 | 1.0 |
| FHCFICPA_92 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_93 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_94 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_95 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_96 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_97 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_98 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_99 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_100 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_101 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_102 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_103 | 1.0 | 0.0 | 1.0 |
| FHCFICPA_104 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_105 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_106 | 1.0 | 0.0 | 1.0 |
| FHCFICPA_107 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_108 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_109 | 1.0 | 0.0 | 1.0 |
| FHCFICPA_111 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_112 | 1.0 | 0.0 | 1.0 |
| FHCFICPA_113 | 1.0 | 0.0 | 1.0 |
| FHCFICPA_114 | 1.0 | 0.0 | 1.0 |
| FHCFICPA_115 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_116 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_117 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_118 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_119 | 1.0 | 0.0 | 1.0 |
| FHCFICPA_120 | 1.0 | 0.0 | 1.0 |
| FHCFICPA_121 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_122 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_123 | 1.0 | 0.0 | 1.0 |
| FHCFICPA_124 | 1.0 | 0.0 | 1.0 |
| FHCFICPA_125 | 1.0 | 0.0 | 1.0 |
| FHCFICPA_126 | 1.0 | 0.0 | 1.0 |
| FHCFICPA_127 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_128 | 0.0 | 1.0 | 0.0 |
| FHCFICPA_129 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FHCFICPA_35 | 139573 | 147268 | False | Siphoviridae | VOG5096, |
| FHCFICPA_47 | 7693 | 19827 | False | Myoviridae | VOG4572, |
Phigaro v2.4.0 (Database: Jan. 2024 release)