Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 1 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| IBCCIFGO_90 | 31599 | 33179 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 87.29 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| IBCCIFGO_16 | 55 | 635 | repUS2 | 584 / 681 | 80.48 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| IBCCIFGO_1 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_2 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_3 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_4 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_5 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_6 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_7 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_8 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_9 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_10 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_11 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_12 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_13 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_14 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_15 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_16 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_17 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_18 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_19 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_20 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_21 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_22 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_23 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_24 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_25 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_27 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_28 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_29 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_30 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_31 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_32 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_33 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_34 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_35 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_36 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_37 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_38 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_39 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_42 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_43 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_44 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_45 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_46 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_47 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_48 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_49 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_50 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_51 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_52 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_53 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_54 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_55 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_56 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_57 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_58 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_59 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_60 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_61 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_62 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_63 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_64 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_65 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_66 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_67 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_68 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_69 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_70 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_71 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_72 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_73 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_74 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_75 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_76 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_77 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_78 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_79 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_80 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_81 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_82 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_83 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_84 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_85 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_86 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_87 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_88 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_89 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_90 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_91 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_92 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_93 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_94 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_95 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_96 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_97 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_98 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_99 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_100 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_101 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_102 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_103 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_104 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_105 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_106 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_107 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_108 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_109 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_110 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_111 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_112 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_113 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_114 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_115 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_116 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_117 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_118 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_119 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_120 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_121 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_122 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_123 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_124 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_125 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_126 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_127 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_128 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_129 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_130 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_131 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_132 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_133 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_134 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_135 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_136 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_137 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_138 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_139 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_140 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_141 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_142 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_143 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_144 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_145 | 1.0 | 0.0 | 1.0 |
| IBCCIFGO_147 | 0.0 | 1.0 | 0.0 |
| IBCCIFGO_148 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| IBCCIFGO_55 | 130547 | 138242 | False | Siphoviridae | VOG5096, |
| IBCCIFGO_103 | 7693 | 19554 | False | Myoviridae | VOG4572, |
Phigaro v2.4.0 (Database: Jan. 2024 release)