Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 2 | 0 | 1 | 2.24 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HEGIJPHM_187 | 2857 | 4782 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| HEGIJPHM_187 | 2857 | 4782 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
| HEGIJPHM_133 | 858 | 1808 | cfxA5 | Unknown Beta-lactam | 86.01 | 98.34 | AY769934 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| HEGIJPHM_187 | 2857 | 4779 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
| HEGIJPHM_133 | 856 | 1809 | cfxA | CfxA family broad-spectrum class A beta-lactamase | BLASTX | 83.33 | 99.07 | WP_004339683.1 |
| HEGIJPHM_112 | 772 | 1260 | erm(F) | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(F) | INTERNAL_STOP | 96.93 | 61.28 | WP_063844771.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| HEGIJPHM_111 | 142313 | 140733 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HEGIJPHM_1 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_2 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_3 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_4 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_5 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_6 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_7 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_8 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_9 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_10 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_11 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_12 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_13 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_14 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_15 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_16 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_17 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_18 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_19 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_20 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_21 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_22 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_23 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_24 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_25 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_26 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_27 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_28 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_29 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_30 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_31 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_32 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_33 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_34 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_35 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_36 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_37 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_38 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_39 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_40 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_41 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_42 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_43 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_44 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_45 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_46 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_47 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_48 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_49 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_50 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_51 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_52 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_53 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_54 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_55 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_56 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_57 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_58 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_59 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_60 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_61 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_62 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_63 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_65 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_66 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_67 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_68 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_69 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_70 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_71 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_72 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_73 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_74 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_75 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_76 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_77 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_78 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_79 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_80 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_81 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_82 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_83 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_84 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_85 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_86 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_87 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_88 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_89 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_90 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_91 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_92 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_93 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_94 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_95 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_96 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_97 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_98 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_99 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_100 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_101 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_102 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_103 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_104 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_105 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_106 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_107 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_108 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_109 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_110 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_111 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_112 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_113 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_114 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_115 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_116 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_117 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_118 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_119 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_120 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_121 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_122 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_123 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_124 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_125 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_126 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_127 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_128 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_129 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_130 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_131 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_132 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_133 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_134 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_135 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_136 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_137 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_138 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_139 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_140 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_141 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_142 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_143 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_144 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_145 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_146 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_147 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_148 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_149 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_150 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_151 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_152 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_153 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_154 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_155 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_156 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_157 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_158 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_159 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_160 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_161 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_162 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_163 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_164 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_165 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_166 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_167 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_168 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_169 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_170 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_171 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_172 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_173 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_174 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_175 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_176 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_177 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_178 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_179 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_180 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_181 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_182 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_183 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_184 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_185 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_186 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_187 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_188 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_189 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_190 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_191 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_192 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_193 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_194 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_195 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_196 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_197 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_198 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_199 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_200 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_201 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_202 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_203 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_204 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_205 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_206 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_207 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_208 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_209 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_210 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_211 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_212 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_213 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_214 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_215 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_217 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_218 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_219 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_220 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_221 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_222 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_223 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_224 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_225 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_226 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_227 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_228 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_229 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_230 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_231 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_232 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_233 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_234 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_235 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_236 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_237 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_238 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_239 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_240 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_241 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_242 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_243 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_244 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_245 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_246 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_247 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_248 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_249 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_250 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_251 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_252 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_253 | 0.0 | 1.0 | 0.0 |
| HEGIJPHM_254 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_255 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_256 | 1.0 | 0.0 | 1.0 |
| HEGIJPHM_257 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HEGIJPHM_111 | 77446 | 81451 | False | Unknown | VOG8253, |
| HEGIJPHM_181 | 3824 | 10623 | False | Unknown | VOG6366, |
| HEGIJPHM_184 | 7625 | 14827 | False | Unknown | VOG0025, |
Phigaro v2.4.0 (Database: Jan. 2024 release)