Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| MIHDMOHK_17 | 731 | 27 | WalR | 4.90e-125 | transcriptional regulatory protein | 84.25 | 100.00 | EPH95667 |
| MIHDMOHK_25 | 19915 | 20112 | CspR | 1.53e-33 | cold shock protein | 87.88 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| MIHDMOHK_75 | 917 | 1497 | repUS2 | 584 / 681 | 80.48 | BFU30316 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| MIHDMOHK_1 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_2 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_3 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_4 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_5 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_6 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_7 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_8 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_9 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_10 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_11 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_12 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_13 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_14 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_15 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_16 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_17 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_18 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_19 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_20 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_21 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_22 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_23 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_24 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_25 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_26 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_27 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_28 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_29 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_30 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_31 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_32 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_33 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_34 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_35 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_36 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_37 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_38 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_39 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_40 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_41 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_42 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_43 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_44 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_45 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_46 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_47 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_48 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_49 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_50 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_51 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_52 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_53 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_54 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_55 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_56 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_57 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_58 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_59 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_60 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_61 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_63 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_64 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_65 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_66 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_67 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_68 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_69 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_71 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_72 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_73 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_74 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_75 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_76 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_77 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_78 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_79 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_80 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_81 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_82 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_83 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_84 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_85 | 1.0 | 0.0 | 1.0 |
| MIHDMOHK_86 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_87 | 0.0 | 1.0 | 0.0 |
| MIHDMOHK_88 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| MIHDMOHK_19 | 902 | 36000 | False | Siphoviridae | VOG4918, VOG0638, VOG0054, VOG1637, VOG5008, VOG4828, VOG4633, VOG6163, VOG2225, VOG4586, VOG0704, VOG0539, VOG4589, VOG0204, VOG5601, VOG4553, VOG4568, VOG4556, VOG3644, VOG4544, VOG4581, VOG4841, VOG4549, VOG10904, VOG4570, VOG0198, VOG3643, VOG2820, VOG9759, VOG9741, VOG4693, VOG6623, VOG7018, VOG7735, VOG0025, VOG4799, VOG3642, VOG10867, VOG0181, VOG4552, VOG4552 |
| MIHDMOHK_58 | 52687 | 63962 | False | Siphoviridae | VOG4589, VOG0204, VOG4568, VOG4556, VOG5051, VOG4544, VOG4581, VOG4609, VOG4632, VOG1581, VOG10397 |
Phigaro v2.4.0 (Database: Jan. 2024 release)