Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KJBIFAGE_60 | 119271 | 120509 | tet(40) | ARO:3000567 | tet(40) | 98.03 | 101.48 | AM419751.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| KJBIFAGE_60 | 119271 | 120491 | tet(40) | Doxycycline, Tetracycline | 99.75 | 100.00 | FJ158002 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| KJBIFAGE_60 | 119274 | 120491 | tet(40) | tetracycline efflux MFS transporter Tet(40) | BLASTX | 99.26 | 100.00 | WP_009247026.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KJBIFAGE_1 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_2 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_3 | 1.0 | 0.0 | 1.0 |
| KJBIFAGE_4 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_5 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_6 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_7 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_8 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_9 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_10 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_11 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_12 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_13 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_14 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_15 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_16 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_17 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_18 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_19 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_20 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_21 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_22 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_23 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_24 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_25 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_26 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_27 | 1.0 | 0.0 | 1.0 |
| KJBIFAGE_28 | 1.0 | 0.0 | 1.0 |
| KJBIFAGE_29 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_30 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_31 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_32 | 1.0 | 0.0 | 1.0 |
| KJBIFAGE_33 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_34 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_35 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_36 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_37 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_38 | 1.0 | 0.0 | 1.0 |
| KJBIFAGE_39 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_40 | 1.0 | 0.0 | 1.0 |
| KJBIFAGE_41 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_42 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_43 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_44 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_45 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_46 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_47 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_48 | 1.0 | 0.0 | 1.0 |
| KJBIFAGE_49 | 1.0 | 0.0 | 1.0 |
| KJBIFAGE_50 | 1.0 | 0.0 | 1.0 |
| KJBIFAGE_52 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_53 | 1.0 | 0.0 | 1.0 |
| KJBIFAGE_54 | 1.0 | 0.0 | 1.0 |
| KJBIFAGE_56 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_57 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_58 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_59 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_60 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_61 | 0.0 | 1.0 | 0.0 |
| KJBIFAGE_62 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KJBIFAGE_12 | 7049 | 16186 | True | Unknown | VOG9115, |
| KJBIFAGE_24 | 114205 | 138258 | False | Myoviridae | VOG4606, |
| KJBIFAGE_24 | 397430 | 410305 | False | Unknown | VOG6459, |
| KJBIFAGE_24 | 419381 | 449026 | False | Myoviridae | VOG5617, |
| KJBIFAGE_35 | 64687 | 71231 | False | Unknown | VOG4004, |
| KJBIFAGE_60 | 98787 | 99775 | False | Myoviridae | VOG0425 |
Phigaro v2.4.0 (Database: Jan. 2024 release)