Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HCIEPHIP_1 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_2 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_3 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_4 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_5 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_6 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_7 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_8 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_9 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_10 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_11 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_12 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_13 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_14 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_15 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_16 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_17 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_18 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_19 | 1.0 | 0.0 | 1.0 |
| HCIEPHIP_20 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_21 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_22 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_23 | 1.0 | 0.0 | 1.0 |
| HCIEPHIP_24 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_25 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_26 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_27 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_28 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_29 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_30 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_31 | 1.0 | 0.0 | 1.0 |
| HCIEPHIP_32 | 1.0 | 0.0 | 1.0 |
| HCIEPHIP_33 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_34 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_35 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_36 | 1.0 | 0.0 | 1.0 |
| HCIEPHIP_37 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_38 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_39 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_40 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_41 | 1.0 | 0.0 | 1.0 |
| HCIEPHIP_42 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_43 | 1.0 | 0.0 | 1.0 |
| HCIEPHIP_44 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_45 | 1.0 | 0.0 | 1.0 |
| HCIEPHIP_46 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_47 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_48 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_50 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_51 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_52 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_54 | 1.0 | 0.0 | 1.0 |
| HCIEPHIP_55 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_56 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_57 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_58 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_59 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_60 | 1.0 | 0.0 | 1.0 |
| HCIEPHIP_61 | 1.0 | 0.0 | 1.0 |
| HCIEPHIP_62 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_63 | 1.0 | 0.0 | 1.0 |
| HCIEPHIP_64 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_65 | 1.0 | 0.0 | 1.0 |
| HCIEPHIP_66 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_67 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_68 | 1.0 | 0.0 | 1.0 |
| HCIEPHIP_69 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_70 | 1.0 | 0.0 | 1.0 |
| HCIEPHIP_71 | 1.0 | 0.0 | 1.0 |
| HCIEPHIP_72 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_73 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_74 | 1.0 | 0.0 | 1.0 |
| HCIEPHIP_75 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_76 | 1.0 | 0.0 | 1.0 |
| HCIEPHIP_77 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_78 | 1.0 | 0.0 | 1.0 |
| HCIEPHIP_79 | 1.0 | 0.0 | 1.0 |
| HCIEPHIP_80 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_82 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_83 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_84 | 1.0 | 0.0 | 1.0 |
| HCIEPHIP_85 | 1.0 | 0.0 | 1.0 |
| HCIEPHIP_86 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_87 | 0.0 | 1.0 | 0.0 |
| HCIEPHIP_88 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HCIEPHIP_11 | 314349 | 342479 | False | Myoviridae | VOG10535, |
| HCIEPHIP_19 | 2770 | 24190 | False | Myoviridae | VOG0051, |
| HCIEPHIP_22 | 17001 | 50212 | False | Myoviridae | VOG5802, |
Phigaro v2.4.0 (Database: Jan. 2024 release)