Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| GPKLHJOM_1 | 1.0 | 0.0 | 1.0 |
| GPKLHJOM_2 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_3 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_4 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_5 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_6 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_7 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_8 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_9 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_10 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_11 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_12 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_13 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_14 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_15 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_16 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_17 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_18 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_19 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_20 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_21 | 1.0 | 0.0 | 1.0 |
| GPKLHJOM_22 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_23 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_24 | 1.0 | 0.0 | 1.0 |
| GPKLHJOM_25 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_26 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_27 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_28 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_29 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_30 | 1.0 | 0.0 | 1.0 |
| GPKLHJOM_31 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_32 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_33 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_34 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_35 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_36 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_37 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_38 | 1.0 | 0.0 | 1.0 |
| GPKLHJOM_39 | 1.0 | 0.0 | 1.0 |
| GPKLHJOM_40 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_41 | 1.0 | 0.0 | 1.0 |
| GPKLHJOM_42 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_43 | 1.0 | 0.0 | 1.0 |
| GPKLHJOM_44 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_45 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_46 | 1.0 | 0.0 | 1.0 |
| GPKLHJOM_47 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_48 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_49 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_50 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_51 | 1.0 | 0.0 | 1.0 |
| GPKLHJOM_52 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_53 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_54 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_55 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_56 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_57 | 1.0 | 0.0 | 1.0 |
| GPKLHJOM_58 | 1.0 | 0.0 | 1.0 |
| GPKLHJOM_59 | 1.0 | 0.0 | 1.0 |
| GPKLHJOM_60 | 1.0 | 0.0 | 1.0 |
| GPKLHJOM_61 | 1.0 | 0.0 | 1.0 |
| GPKLHJOM_62 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_63 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_64 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_65 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_66 | 1.0 | 0.0 | 1.0 |
| GPKLHJOM_67 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_68 | 1.0 | 0.0 | 1.0 |
| GPKLHJOM_69 | 1.0 | 0.0 | 1.0 |
| GPKLHJOM_70 | 1.0 | 0.0 | 1.0 |
| GPKLHJOM_71 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_72 | 1.0 | 0.0 | 1.0 |
| GPKLHJOM_73 | 1.0 | 0.0 | 1.0 |
| GPKLHJOM_74 | 1.0 | 0.0 | 1.0 |
| GPKLHJOM_75 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_76 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_77 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_78 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_79 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_80 | 1.0 | 0.0 | 1.0 |
| GPKLHJOM_81 | 1.0 | 0.0 | 1.0 |
| GPKLHJOM_82 | 1.0 | 0.0 | 1.0 |
| GPKLHJOM_83 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_84 | 1.0 | 0.0 | 1.0 |
| GPKLHJOM_85 | 1.0 | 0.0 | 1.0 |
| GPKLHJOM_86 | 1.0 | 0.0 | 1.0 |
| GPKLHJOM_87 | 1.0 | 0.0 | 1.0 |
| GPKLHJOM_88 | 1.0 | 0.0 | 1.0 |
| GPKLHJOM_89 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_90 | 0.0 | 1.0 | 0.0 |
| GPKLHJOM_91 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| GPKLHJOM_8 | 8816 | 32121 | False | Myoviridae | VOG0574, |
| GPKLHJOM_12 | 162301 | 195512 | False | Myoviridae | VOG5802, |
| GPKLHJOM_23 | 102335 | 130464 | False | Myoviridae | VOG0979, |
| GPKLHJOM_23 | 241842 | 248280 | True | Unknown | VOG0221, |
Phigaro v2.4.0 (Database: Jan. 2024 release)