Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| HJNCLIDE_1 | 1.0 | 0.0 | 1.0 |
| HJNCLIDE_2 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_3 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_4 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_5 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_6 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_7 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_8 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_9 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_10 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_11 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_12 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_13 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_14 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_15 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_16 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_17 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_18 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_19 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_20 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_21 | 1.0 | 0.0 | 1.0 |
| HJNCLIDE_22 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_23 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_24 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_25 | 1.0 | 0.0 | 1.0 |
| HJNCLIDE_26 | 1.0 | 0.0 | 1.0 |
| HJNCLIDE_27 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_28 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_29 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_30 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_31 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_32 | 1.0 | 0.0 | 1.0 |
| HJNCLIDE_33 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_34 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_35 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_36 | 1.0 | 0.0 | 1.0 |
| HJNCLIDE_37 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_38 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_39 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_40 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_41 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_42 | 1.0 | 0.0 | 1.0 |
| HJNCLIDE_43 | 1.0 | 0.0 | 1.0 |
| HJNCLIDE_44 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_45 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_46 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_47 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_48 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_49 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_50 | 1.0 | 0.0 | 1.0 |
| HJNCLIDE_51 | 1.0 | 0.0 | 1.0 |
| HJNCLIDE_52 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_53 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_54 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_55 | 1.0 | 0.0 | 1.0 |
| HJNCLIDE_56 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_57 | 1.0 | 0.0 | 1.0 |
| HJNCLIDE_58 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_59 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_60 | 1.0 | 0.0 | 1.0 |
| HJNCLIDE_61 | 1.0 | 0.0 | 1.0 |
| HJNCLIDE_62 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_63 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_64 | 1.0 | 0.0 | 1.0 |
| HJNCLIDE_65 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_66 | 1.0 | 0.0 | 1.0 |
| HJNCLIDE_67 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_68 | 1.0 | 0.0 | 1.0 |
| HJNCLIDE_69 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_70 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_71 | 1.0 | 0.0 | 1.0 |
| HJNCLIDE_72 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_73 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_74 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_75 | 1.0 | 0.0 | 1.0 |
| HJNCLIDE_76 | 1.0 | 0.0 | 1.0 |
| HJNCLIDE_77 | 1.0 | 0.0 | 1.0 |
| HJNCLIDE_78 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_79 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_80 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_81 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_82 | 1.0 | 0.0 | 1.0 |
| HJNCLIDE_83 | 1.0 | 0.0 | 1.0 |
| HJNCLIDE_84 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_85 | 1.0 | 0.0 | 1.0 |
| HJNCLIDE_86 | 1.0 | 0.0 | 1.0 |
| HJNCLIDE_87 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_88 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_89 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_90 | 0.0 | 1.0 | 0.0 |
| HJNCLIDE_91 | 1.0 | 0.0 | 1.0 |
| HJNCLIDE_92 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| HJNCLIDE_12 | 257926 | 291137 | False | Myoviridae | VOG0979, |
| HJNCLIDE_21 | 8816 | 29347 | False | Myoviridae | VOG0574, |
| HJNCLIDE_23 | 102335 | 130465 | False | Myoviridae | VOG0979, |
| HJNCLIDE_23 | 241843 | 248820 | True | Unknown | VOG0221, |
Phigaro v2.4.0 (Database: Jan. 2024 release)