Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 0 | 1.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JNNEHKAM_91 | 3962 | 5200 | tet(40) | ARO:3000567 | tet(40) | 98.03 | 101.48 | AM419751.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| JNNEHKAM_91 | 3980 | 5200 | tet(40) | Doxycycline, Tetracycline | 99.75 | 100.00 | FJ158002 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| JNNEHKAM_91 | 3980 | 5197 | tet(40) | tetracycline efflux MFS transporter Tet(40) | BLASTX | 99.26 | 100.00 | WP_009247026.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| JNNEHKAM_1 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_2 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_3 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_4 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_5 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_6 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_7 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_8 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_9 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_10 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_11 | 1.0 | 0.0 | 1.0 |
| JNNEHKAM_12 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_13 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_14 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_15 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_16 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_17 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_18 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_19 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_20 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_21 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_22 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_23 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_24 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_25 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_26 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_27 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_28 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_29 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_30 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_31 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_32 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_33 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_34 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_35 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_36 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_37 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_38 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_39 | 1.0 | 0.0 | 1.0 |
| JNNEHKAM_40 | 1.0 | 0.0 | 1.0 |
| JNNEHKAM_41 | 1.0 | 0.0 | 1.0 |
| JNNEHKAM_42 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_43 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_44 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_45 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_46 | 1.0 | 0.0 | 1.0 |
| JNNEHKAM_47 | 1.0 | 0.0 | 1.0 |
| JNNEHKAM_48 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_49 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_50 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_51 | 1.0 | 0.0 | 1.0 |
| JNNEHKAM_52 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_53 | 1.0 | 0.0 | 1.0 |
| JNNEHKAM_54 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_55 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_56 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_57 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_58 | 1.0 | 0.0 | 1.0 |
| JNNEHKAM_59 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_60 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_61 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_62 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_63 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_64 | 1.0 | 0.0 | 1.0 |
| JNNEHKAM_65 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_66 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_67 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_68 | 1.0 | 0.0 | 1.0 |
| JNNEHKAM_69 | 1.0 | 0.0 | 1.0 |
| JNNEHKAM_70 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_71 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_72 | 1.0 | 0.0 | 1.0 |
| JNNEHKAM_73 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_74 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_75 | 1.0 | 0.0 | 1.0 |
| JNNEHKAM_76 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_78 | 1.0 | 0.0 | 1.0 |
| JNNEHKAM_79 | 1.0 | 0.0 | 1.0 |
| JNNEHKAM_80 | 1.0 | 0.0 | 1.0 |
| JNNEHKAM_81 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_82 | 1.0 | 0.0 | 1.0 |
| JNNEHKAM_84 | 1.0 | 0.0 | 1.0 |
| JNNEHKAM_85 | 1.0 | 0.0 | 1.0 |
| JNNEHKAM_86 | 1.0 | 0.0 | 1.0 |
| JNNEHKAM_87 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_88 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_89 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_90 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_91 | 0.0 | 1.0 | 0.0 |
| JNNEHKAM_92 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| JNNEHKAM_11 | 13690 | 26565 | False | Unknown | VOG6459, |
| JNNEHKAM_11 | 35641 | 65286 | False | Myoviridae | VOG5617, |
| JNNEHKAM_21 | 7049 | 16186 | True | Unknown | VOG9115, |
| JNNEHKAM_59 | 82183 | 88727 | False | Unknown | VOG0705, |
| JNNEHKAM_91 | 24694 | 25682 | False | Siphoviridae | VOG4602 |
Phigaro v2.4.0 (Database: Jan. 2024 release)