Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 1 | 1.41 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BIDGMMIA_71 | 5535 | 7508 | tet(Q) | ARO:3000191 | tet(Q) | 96.35 | 100.00 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| BIDGMMIA_71 | 5583 | 7508 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| BIDGMMIA_71 | 5583 | 7505 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| BIDGMMIA_40 | 62394 | 63974 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| BIDGMMIA_1 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_2 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_3 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_4 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_6 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_7 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_8 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_9 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_10 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_11 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_12 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_14 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_15 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_16 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_17 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_19 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_20 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_22 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_24 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_25 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_26 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_27 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_28 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_30 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_31 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_32 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_33 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_34 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_35 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_37 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_38 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_39 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_40 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_42 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_43 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_44 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_45 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_46 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_47 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_48 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_49 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_50 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_51 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_52 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_53 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_54 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_55 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_56 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_57 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_58 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_59 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_60 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_61 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_62 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_63 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_64 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_65 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_66 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_67 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_68 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_69 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_70 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_71 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_72 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_73 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_74 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_75 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_76 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_77 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_78 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_79 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_80 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_81 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_82 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_83 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_84 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_85 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_86 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_87 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_88 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_89 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_90 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_91 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_92 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_93 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_94 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_95 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_96 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_97 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_98 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_99 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_100 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_101 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_102 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_103 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_104 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_105 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_106 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_107 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_108 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_109 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_110 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_111 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_112 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_113 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_114 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_115 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_116 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_117 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_118 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_119 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_120 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_121 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_122 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_123 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_124 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_125 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_126 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_127 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_128 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_129 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_130 | 0.0 | 1.0 | 0.0 |
| BIDGMMIA_131 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_132 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_133 | 1.0 | 0.0 | 1.0 |
| BIDGMMIA_134 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)