Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 1 | 0 | 1 | 1.41 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DHHBAKDC_18 | 84029 | 85954 | tet(Q) | ARO:3000191 | tet(Q) | 96.41 | 97.56 | Z21523.1 |
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| DHHBAKDC_18 | 84029 | 85954 | tet(Q) | Doxycycline, Tetracycline, Minocycline | 99.84 | 100.00 | L33696 |
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| DHHBAKDC_18 | 84029 | 85951 | tet(Q) | tetracycline resistance ribosomal protection protein Tet(Q) | BLASTX | 99.53 | 100.00 | WP_063856407.1 |
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| DHHBAKDC_30 | 62394 | 63974 | GroEL | 0.0 | folding of newly synthesized proteins, preventing misfolding and aggregation | 86.91 | 96.70 | BAA04222 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| DHHBAKDC_69 | 6792 | 6945 | Col156 | 154 / 154 | 96.75 | NC009781 |
| DHHBAKDC_114 | 417 | 669 | Col(MG828) | 253 / 262 | 92.89 | NC008486 |
| DHHBAKDC_91 | 3432 | 3633 | Col8282 | 202 / 207 | 89.60 | DQ995352 |
| DHHBAKDC_93 | 917 | 1036 | ColRNAI | 121 / 130 | 89.26 | DQ298019 |
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| DHHBAKDC_1 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_2 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_3 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_4 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_5 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_6 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_7 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_8 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_10 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_11 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_12 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_13 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_14 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_15 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_16 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_17 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_18 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_19 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_20 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_21 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_22 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_23 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_24 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_25 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_26 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_27 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_28 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_29 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_30 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_31 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_32 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_33 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_34 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_35 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_36 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_37 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_38 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_39 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_40 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_41 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_42 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_43 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_44 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_45 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_46 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_47 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_48 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_49 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_50 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_51 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_52 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_53 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_54 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_55 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_56 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_57 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_58 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_59 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_60 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_61 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_62 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_63 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_64 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_65 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_66 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_67 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_68 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_69 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_70 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_71 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_72 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_73 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_74 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_75 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_77 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_78 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_79 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_80 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_81 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_82 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_83 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_84 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_85 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_86 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_87 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_88 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_89 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_90 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_91 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_92 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_93 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_94 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_95 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_96 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_97 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_98 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_100 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_101 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_102 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_104 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_105 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_106 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_107 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_108 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_109 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_110 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_111 | 0.0 | 1.0 | 0.0 |
| DHHBAKDC_112 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_113 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_114 | 1.0 | 0.0 | 1.0 |
| DHHBAKDC_116 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| No hit found | |||||
Phigaro v2.4.0 (Database: Jan. 2024 release)