Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 2 | 2.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| KNNBOPII_86 | 84311 | 85015 | WalR | 1.75e-112 | transcriptional regulatory protein | 83.40 | 100.00 | EPH95667 |
| KNNBOPII_24 | 10398 | 10595 | CspR | 8.14e-34 | cold shock protein | 89.39 | 100.00 | AAO82613 |
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| KNNBOPII_1 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_2 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_3 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_4 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_5 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_6 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_7 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_8 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_9 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_10 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_11 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_12 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_13 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_14 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_15 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_16 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_17 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_18 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_19 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_20 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_21 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_22 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_23 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_24 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_25 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_26 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_27 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_28 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_29 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_30 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_31 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_32 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_33 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_34 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_35 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_36 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_37 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_38 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_39 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_40 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_41 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_42 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_43 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_44 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_45 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_46 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_47 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_48 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_49 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_50 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_51 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_52 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_53 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_54 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_55 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_56 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_57 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_58 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_59 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_60 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_61 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_62 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_64 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_65 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_66 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_67 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_68 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_69 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_70 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_71 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_72 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_73 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_74 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_75 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_76 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_77 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_78 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_79 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_80 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_81 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_82 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_83 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_84 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_85 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_86 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_87 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_88 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_89 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_90 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_91 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_92 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_93 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_94 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_95 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_96 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_97 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_98 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_99 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_100 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_101 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_102 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_103 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_104 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_105 | 0.0 | 1.0 | 0.0 |
| KNNBOPII_106 | 1.0 | 0.0 | 1.0 |
| KNNBOPII_107 | 1.0 | 0.0 | 1.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| KNNBOPII_39 | 17424 | 36928 | False | Siphoviridae | VOG9897, VOG4602, VOG6495, VOG5353, VOG4552, VOG10867, VOG4600, VOG1309, VOG11003, VOG4566, VOG0189, VOG7363, VOG5998, VOG6795, VOG5562, VOG4693, VOG0744, VOG4673, VOG4841, VOG0519, VOG4544, VOG4556, VOG4573, VOG4553, VOG0204 |
| KNNBOPII_48 | 22642 | 53123 | False | Siphoviridae | VOG6083, VOG4649, VOG0602, VOG7017, VOG0861, VOG4856, VOG4619, VOG0801, VOG1323, VOG0725, VOG0799, VOG1321, VOG9583, VOG1320, VOG4713, VOG1322, VOG0694, VOG4555, VOG1183, VOG4564, VOG0720, VOG10227, VOG3699 |
Phigaro v2.4.0 (Database: Jan. 2024 release)