Probiotic potential risk score
| ARGs | VFs | PGs | PPRS |
|---|---|---|---|
| 0 | 0 | 0 | 0.00 |
PPRS is classified as low-risk (≤4), medium-risk (4-6), and high-risk (≥6).
Antibiotic resistance genes
Comprehensive Antibiotic Resistance Database (CARD)
| Query ID | Begin | End | ARO name | ARO accession | CARD name | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
RGI v6.0.3 (Database: CARD Variants v4.0.2, Nov. 2023 release)
ResFinder
| Query ID | Begin | End | Resistance gene | Phenotype | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|
| No hit found | |||||||
ResFinder v4.6.0 (Database: resfinder_db, Aug. 2024 release)
AMRFinderPlus
| Query ID | Begin | End | Gene symbol | Sequence name | Method | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
AMRFinderPlus v4.0.3 (Database: Oct. 2024 release)
Virulence factors
Virulence Factor Database (VFDB)
| Query ID | qstart | qend | Gene name | e-value | VF name | VF category | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|---|
| No hit found | |||||||||
BLASTN v2.16.0 (Database: VFDB, Dec. 2024 release)
VirulenceFinder
| Query ID | Begin | End | Database | Virulence factor | Protein function | Identity | Coverage | Accession no. |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
VirulenceFinder v2.0. 4 (Database: virulencefinder_db, Feb . 2024 release)
Pathogenic genes
PHI-base
| Query ID | qstart | qend | Gene name | e-value | Function | Identity | Coverage | Gene ID |
|---|---|---|---|---|---|---|---|---|
| No hit found | ||||||||
BLASTX v2.16.0 (Database: PHI base v4.16, May. 2024 release)
Plasmid
PlasmidFinder
| Query ID | Begin | End | Plasmid | Query / Template | Identity | Accession no. |
|---|---|---|---|---|---|---|
| No hit found | ||||||
PlasmidFinder v 2.1.6 (Database: plasmidfinder_db v 2.2.0 , Nov. 2024 release)
PlasmidHunter
| Query ID | Prediction | Chromosome | Plasmid |
|---|---|---|---|
| FMHLDNHN_1 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_2 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_3 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_4 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_5 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_6 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_7 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_8 | 1.0 | 0.0 | 1.0 |
| FMHLDNHN_9 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_10 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_11 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_12 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_13 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_14 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_15 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_16 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_17 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_18 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_19 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_20 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_21 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_22 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_23 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_24 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_25 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_26 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_27 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_28 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_29 | 1.0 | 0.0 | 1.0 |
| FMHLDNHN_30 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_31 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_32 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_33 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_34 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_35 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_36 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_37 | 1.0 | 0.0 | 1.0 |
| FMHLDNHN_38 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_39 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_40 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_41 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_42 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_43 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_44 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_45 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_46 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_47 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_48 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_49 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_50 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_51 | 1.0 | 0.0 | 1.0 |
| FMHLDNHN_52 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_53 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_54 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_55 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_56 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_57 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_58 | 0.0 | 1.0 | 0.0 |
| FMHLDNHN_59 | 0.0 | 1.0 | 0.0 |
PlasmidHunter v 1.4.5 (Database: May. 2024 release)
Prophage
Phigaro
| Query ID | Begin | End | Transposable | Taxonomy | pVOGs |
|---|---|---|---|---|---|
| FMHLDNHN_1 | 43612 | 47964 | False | Siphoviridae | VOG2401, VOG4602, VOG11075, VOG9667, VOG1356, VOG7236, VOG8609, VOG1250 |
| FMHLDNHN_1 | 56485 | 85014 | False | Myoviridae | VOG0376, VOG2545, VOG0796, VOG7407, VOG1912, VOG5027, VOG4918, VOG1915, VOG1942, VOG4778, VOG1353, VOG1881, VOG1883, VOG1352, VOG4699, VOG6163, VOG1956, VOG1433, VOG1348, VOG0573, VOG4550, VOG4691, VOG4845, VOG5334, VOG2170 |
| FMHLDNHN_8 | 5010 | 19954 | False | Myoviridae | VOG4699, VOG1352, VOG1883, VOG1881, VOG1353, VOG4778, VOG1942, VOG6932, VOG1915, VOG4865, VOG5027, VOG1912, VOG7407, VOG0796, VOG0686, VOG0198, VOG8232 |
| FMHLDNHN_10 | 3621 | 30000 | False | Siphoviridae | VOG4856, VOG4645, VOG4659, VOG4633, VOG4760, VOG0701, VOG9763, VOG0698, VOG0697, VOG0696, VOG0695, VOG1329, VOG4555, VOG0686, VOG0692, VOG0691, VOG4544, VOG5532, VOG4618 |
| FMHLDNHN_10 | 32526 | 37747 | False | Siphoviridae | VOG0557, VOG0189, VOG9667, VOG4566, VOG0906, VOG9708, VOG0650 |
| FMHLDNHN_13 | 14731 | 21622 | False | Myoviridae | VOG0226, VOG0384, VOG0382, VOG0348 |
Phigaro v2.4.0 (Database: Jan. 2024 release)